YALI0F28633g

Overview

Description some similarities with uniprot|Q6C8I4 Yarrowia lipolytica YALI0D19360g, Beta-lactamase/transpeptidase- like domain containing protein
Locus type CDS
Locus tag YALI0F28633g

Location

Species Yarrowia lipolytica Positions 3635183..3637436
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2254 (nuc.)
Previous locus YALI0F28611g Next locus YALI0F28655g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28633g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28633gYALI0F28633g_mRNA-001YALI0F28633g_CDS-001

Nucleotide sequence

 

>YALI0F28633g
ATGGACATCTTTCTACAGACCCTGTTGGGTTCTGTCATGCTCAACCAGCATGTAGACGAA
GAAAGCTCATACTACGAGTTTTTCAGTGGGTGGATCTCTCGAAACCAACACAAGTGGGGG
GTCATGACCACCAGAGCGTATCAGAACGCAGTGGGAAGATCGGAGGAATATCTGCTGACA
ACCCATAGACGTACCGAGAAGAAATTACAGCTCGAAATTTCGGAACGGTCCTTACCATGG
CTGGTTTTAGCATCTCATGTGCTCTTGGGGTTCACGACAGACGCAGCCCAGATCTCAGAA
CTGATGGTCTTCTGTGGGTTCAGGAGAGTACACGAGAAGGTTATTAAATCAATTGTCGAA
TGGTCGACGTATCCTTCACGCCTGAACATGGGCGACACATCCCAGGAGTACACAATTACG
GCATTTGAGAATCTACAGAAAGCATTCTCAGAGGGTGACGGTAGTGAAAGCATAGGATGG
AGGCGACTGGGATACCAGAAGCTCATGTGGAAGACGATATATCAACATCATCTATCGACG
CCTGATCTCAACCCCATGTTTAACACCGCTGGCATTATTTTCTATGGTCTGATTTCGCTG
GATGATGACCGGTATGCAGTGCTATTCATCGATGCAGTGACTGAAGCATTGCAGTTCTCA
CGACAATTCAGCGCCAACAACGAAATTGAACTAGCTCAGCATATTGCTGATACCATCGCT
GCATACATGAAGGAGTACGGCCATCCCTGGTACTTTATTTTGCTCAACCCTTTGCGAGGC
TGGCTACACTCAACCATGTCGAAGGCACTTGGCATGCTAACTGAGCCCTCAGCTTGTCAA
TTCATTGCTCCTCGACAGCTCACCGCCAATTTGAAACTGGTCCCCACAAAAGTAGAAGCT
CTTCTGTCCTCCATCCAGCAGATGCTGCAAGATGAAAGCATCATGAAGGAATACCCGCCG
TTCAGTCTGGTCGAATACGACGGCCCATGGCCTTTGGTGTTTGTTGAGAATCTGCATTGG
AGCCAGCATCAACTGAGCAGCACACATCCTAATGTCTTTGAACAGGTTTCCAAGAACAAC
CCCGAATTGAAGTTCGCCAAGGAACTGCGGGTCGTAGACTTGCCCAGTTTGGAAACAGGT
GAAATTAGCCATGACAGTTTCGAACTACTAAAATGCCAGGCACCTAGTGGTGTCGGACAG
AATGAGGGCATTACTGACAACGCTGGACTGCAGGATGAGCTGTTGGATAGGAACTTTGCA
TCTCTCATGAAACGTTCAAATGAGTTCAATATTGTACCTGGGAGGGACTATCAGACTTCA
CCAGTAGATTACATTTCCAGAAAGATGGTTCTGCACATCTGGCAATGTTTCAAGCTTCGA
GAGACCATGGCTACCAACGGACAAACGCGAATGTTGGATTTTGACGACCTGGTTCACGTG
CTTTCTCGTGGCCATGATGTCTATAAGGTGATTAATCATGAGGAGGCACTGTGGCAGTCC
AAAGGAGTCGAGATTGCCCATGGGTTGGATGATTGCATTCTCATATTTATTGGAGCTGAC
TCGGCCATTCAACAAGTAACATGGTGGGAAGAAGGACGTCTGGGCTGGGATGTTTTTTCT
CAGGAATCAATGGTGAGTTTCCTGCCCAAGACTGTGGAAGAAGCCGTTGAAGAAGGCGGG
AGACGTGATGCCCCTATTCAGCTGTCTGAGTCAGATGATGAGGACCCTGTCAATGCTAAA
GATACGATGAGCACCCCCACTCAGCGACGAAGCCGGAGAGTTAGAGAACAGGAAGTTGGT
TCGGCGGAAACTGAGGAACCCAATGGGTATGATTTCGATTCATCTTCTGAAGACGACCTC
GAGAGGACCGTATCTGACCCTGCGCTGCCTGCGCAAGCCCAGCGACGCACGTCCACCCAA
GTCCCTGCTCATCTCAGAGGCCTCTATGACAGCATTGACCCTGCTATGAGAGAAGGCCTT
TACAACAAGAAGCATCCCCTTATTAGAAATCTTGTCAAGCTGATTCCCAAACTATCGGAC
CGAAATATGACGGAAGACTCAAGGCCATTTTCATACGATATCAGAGAGGCGTTGGGCCTT
GCTGAGGGGGATAATGATGTTGAGACGAACGGAAACTGAGATGGCATACGGTGGCTTAAA
ATGCAACCATTATTTATTCATATGGGTAGGAAATACACAGGTCTACTCAAATCGTTAACA
ATACAATAAATCAATAACATACAAAAGCGTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28633g_CDS-001

Protein length: 713 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F28633g_CDS-001 MDIFLQTLLGSVMLNQHVDEESSYYEFFSGWISRNQHKWGVMTTRAYQNAVGRSEEYLLT
THRRTEKKLQLEISERSLPWLVLASHVLLGFTTDAAQISELMVFCGFRRVHEKVIKSIVE
WSTYPSRLNMGDTSQEYTITAFENLQKAFSEGDGSESIGWRRLGYQKLMWKTIYQHHLST
PDLNPMFNTAGIIFYGLISLDDDRYAVLFIDAVTEALQFSRQFSANNEIELAQHIADTIA
AYMKEYGHPWYFILLNPLRGWLHSTMSKALGMLTEPSACQFIAPRQLTANLKLVPTKVEA
LLSSIQQMLQDESIMKEYPPFSLVEYDGPWPLVFVENLHWSQHQLSSTHPNVFEQVSKNN
PELKFAKELRVVDLPSLETGEISHDSFELLKCQAPSGVGQNEGITDNAGLQDELLDRNFA
SLMKRSNEFNIVPGRDYQTSPVDYISRKMVLHIWQCFKLRETMATNGQTRMLDFDDLVHV
LSRGHDVYKVINHEEALWQSKGVEIAHGLDDCILIFIGADSAIQQVTWWEEGRLGWDVFS
QESMVSFLPKTVEEAVEEGGRRDAPIQLSESDDEDPVNAKDTMSTPTQRRSRRVREQEVG
SAETEEPNGYDFDSSSEDDLERTVSDPALPAQAQRRTSTQVPAHLRGLYDSIDPAMREGL
YNKKHPLIRNLVKLIPKLSDRNMTEDSRPFSYDIREALGLAEGDNDVETNGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG