YALI0F28611g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F28611g

Location

Species Yarrowia lipolytica Positions 3634079..3634894
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 816 (nuc.)
Previous locus YALI0F2860Ot Next locus YALI0F28633g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28611g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28611gYALI0F28611g_mRNA-001YALI0F28611g_CDS-001

Nucleotide sequence

 

>YALI0F28611g
ATGAAGGTCCAGTCTGTTTTTGTCTTTTCTCTTGCTGCTATCGCCGCTGCGTTCGAGGCA
GGCATCACTGATGCTGACAACATGCCCGTTCCCACCCCCGTTGAGAACTTTGGTGAAGAG
ATCGTTGATCTCCCTCTCGTTACTGGAGAGAGTGTCATTGACGAGGCTACCAACGAATAT
GAGTACAGCGAGGGCGACTATGAGGGTAACACTAACGAGGAGCTTACTGATTACTTCATG
CAGGACTATCAGGGAGATGCCGAGAACCCCGAGGATATCCACAAGCTGATTGACCACATC
AAGGAGAAGAAGTGCCCCAAGAAGAAGTGCCTCAACAAGATTGTTAAGACTAAGACCTGC
TACGTCACTCTGCACAAGCTACACTACAAGACAGTCAAGAAGCCTTGTGCCGTCCCGACC
AAGCACCTCAAGAAGCCCGTGAAGAAGCAACCCTCCAAGAAGCAGCGATGCCCCAACTGT
GGATCCACCAACTGTGATGGCGGCAACCAATGTCCCAACAAGGGCAACAAGGGCAACAAT
AAGAAGCAGCAGAGCAAGAAGCAGCAATGCCCCAACTGTGGTTCAGTCAACTGTGATGGC
GGCAACCAGTGTCCCAATAAGGGCAATAAGGGCAACAAGGGCAACAAGAATAATAACAAG
GCCCAGCGGTGTCCCAACTGTGGAGACACTAGCTGCGGTGGCTGCTCTGGAAAGAACCAC
AACAAGTGCCCCAACTGCGGTTCTCGAAATTGCGGTGGAAACTGTTAGATTATTTTGTAA
GCGTTTATTTTAGTGTTAAAAGATTAATTGGTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28611g_CDS-001

Protein length: 256 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F28611g_CDS-001 MKVQSVFVFSLAAIAAAFEAGITDADNMPVPTPVENFGEEIVDLPLVTGESVIDEATNEY
EYSEGDYEGNTNEELTDYFMQDYQGDAENPEDIHKLIDHIKEKKCPKKKCLNKIVKTKTC
YVTLHKLHYKTVKKPCAVPTKHLKKPVKKQPSKKQRCPNCGSTNCDGGNQCPNKGNKGNN
KKQQSKKQQCPNCGSVNCDGGNQCPNKGNKGNKGNKNNNKAQRCPNCGDTSCGGCSGKNH
NKCPNCGSRNCGGNC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG