YALI0F28545g

Overview

Description weakly similar to uniprot|D5GA26 Tuber melanosporum GSTUM_00003541001 hypothetical protein
Locus type CDS
Locus tag YALI0F28545g

Location

Species Yarrowia lipolytica Positions 3627539..3628928
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1390 (nuc.)
Previous locus YALI0F28523g Next locus YALI0F28567g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28545g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28545gYALI0F28545g_mRNA-001YALI0F28545g_CDS-001

Nucleotide sequence

 

>YALI0F28545g
ATGACGCCTCCGGACGACCCTATTGCCAACATTTTGGCTGGAGTGAACAAAATTAAACAC
AAGGCGTCCACCATCATTAATGACAAGCTGGGAGACGCCGAAGAGGCCCAGCACCAGGTT
GGCACATGGCTCTTGAACCGCAAAAAGGATATCCAGTCCGTTCTGACTCCTGCCAAGCTG
GAGCACTTCAGTCCCGGGCCTCCTCCCCCTCCCCCATCATACTATGACAAAATCACCGGC
TTTGTGTCCGCTCACAAACTGGCTGTCGGTCTGGTCACCATCAGTGCTGTGACCGCCTCC
GGATACTATATGTGGAACAACCGAATTCTGCCCGGAGGACTGTTCGGCAACAAAAAGCAG
CCGCGACGAAGAGCAGTGAGAGCTGCCAATGGAGCACGAACCGAAGTGGTTGTGCTGGCC
GGTTCTTTCCTAGAACCTATCGTGAGAGTGGTTGCTAACGATCTGGACAAGCGAGGTTTC
ATTGTCTATGTCACTACTACCTCCGAAGCCGAGACCGCACTGATCGAGAAGGAGAACTCC
GCAGACATCCGGTCCCTCAGTGTCAACACCCAAAAGGCCGACGTCATCAAGTCAACCATG
AAAGAGTTTGGTACCTTCCTGGCTACTCCCCAGGTGGCGTTCCCTAATGCCAAGCCCCAC
GTCTTGAGACTGGCTGGCGTTGTGCTCGTTCCCGACCTCTACTATCCCTTTGGTCCCATA
GAGCAGATGCATCTGGAGTCCTGGAACTCTGTCATCAACAGTAAGCTTTTGGCTCCTCTG
GCTCTGCTGTCCCAGGGTCTGCTGACTCTGGTTCGACAGACCGCCTCCACCCCCAACCCT
GCCCGTCTCGTCATTGTTACCCCTAACATTACCGCTGCCCTTTCTCCTGCTTACTCTGCT
CCTGAGGCCATGGTTGTCTCCGGTATCAACGCTCTTGCCACTTCTCTTGACCGAGAGCTT
GCTCCTCACGGTATCAAAACTACACATATCCGCCTTGGCTCCTTCGACGTCTCCCACGGC
CACTCTCAATCCAAACAGCTGGCCTCTGCAATCCATGCGGATCTCATTACCTGGTCTGAA
GATATGAGAGCTGCCTACTCCAACTACGGAGGAACAATGGCCTTCCTCTACGGCTGCCGA
AGCACACGAGGATCGTCTCTGAAGAGACTGAATTTCGCCATTTACGATTCTCTGACTGTG
CGACGGCCCAAGCGAGTGTGGCATGTTGGGTTCGGATCCAGAATGTACGAGCTGGTTGCT
GCCTTCCTGCCAGAGTGCGTGCTGTCGTGGCTCATGCGATCCGGAGCTGCTCTTAGAAAA
CGATCCTTTGACAAGGAACTGAATGGTATGTAAATAGAAGTTGTAGTAATGATGAAATGA
CAGATGTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28545g_CDS-001

Protein length: 451 aa.
Product: Conserved hypothetical protein

>YALI0F28545g_CDS-001 MTPPDDPIANILAGVNKIKHKASTIINDKLGDAEEAQHQVGTWLLNRKKDIQSVLTPAKL
EHFSPGPPPPPPSYYDKITGFVSAHKLAVGLVTISAVTASGYYMWNNRILPGGLFGNKKQ
PRRRAVRAANGARTEVVVLAGSFLEPIVRVVANDLDKRGFIVYVTTTSEAETALIEKENS
ADIRSLSVNTQKADVIKSTMKEFGTFLATPQVAFPNAKPHVLRLAGVVLVPDLYYPFGPI
EQMHLESWNSVINSKLLAPLALLSQGLLTLVRQTASTPNPARLVIVTPNITAALSPAYSA
PEAMVVSGINALATSLDRELAPHGIKTTHIRLGSFDVSHGHSQSKQLASAIHADLITWSE
DMRAAYSNYGGTMAFLYGCRSTRGSSLKRLNFAIYDSLTVRRPKRVWHVGFGSRMYELVA
AFLPECVLSWLMRSGAALRKRSFDKELNGM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG