YALI0F28193g

Overview

Description similar to uniprot|P53322 Saccharomyces cerevisiae YGR260w TNA1 similarity to allantoate transport protein
Locus type CDS
Locus tag YALI0F28193g

Location

Species Yarrowia lipolytica Positions 3586025..3587615
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1591 (nuc.)
Previous locus YALI0F28171g Next locus YALI0F28215g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28193g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28193gYALI0F28193g_mRNA-001YALI0F28193g_CDS-001

Nucleotide sequence

 

>YALI0F28193g
ATGGAGAAGACCGACGCTACTCACATTGAATCCGCCTCCATTGAGGAGGATTTCAAGAAT
GGCACTCAGATCACCATCACCGACCCCGAGAAGGCCTCGGGAGAGCTCATGGCGACCGCT
GAGGAGCTTTACCCCAGCGTAGACAAGAAAAAGCTGCTACGAAAGATGGACTTCCACATC
ATCCCCATGCTTTCTCTTCTCTACCTTCTGTGTTTCCTCGATCGAGGTAACATTGGTAAC
GCTAACATCGAGGGCCTTTCTACAGATCTCAACCTCACCGGTGAGCAGTACAACATGGCC
CTCACTGTCTTCTTCTTCACCTATGCACCCCTCGAAGTCCCCTCTAACATGCTGCTCAAG
AAGTTCCGACCCTCCATCTGGCTCCCTTCCATCATGGTTGCCTGGGGACTGGTTATGACT
CTGATGGGCATTGTTCAGAACTATGGAGGTCTTCTCGCTACACGAGTCCTGCTCGGTGTC
TTCGAGGCTGGTCTGTTCCCTGGTGTCGCATATTATCTTACAACTTGGTACTGCCGATCC
GAGCTCCAGTTCCGACAGGCAATGTTCTTCTCTGCCGCTTCCGTGGCTGGTGCATTTTCT
GGTCTACTTGCCTTCGCCATTTCCAAGATGCGAGGCGTCGCTGGACTCGAGGGATGGAGA
TGGATCTTCATCCTCGAAGGTATCGCCACCGTTGTTGTTGGATTCATTGCCTACTTTACT
CTCTACGATTACCCTGAGACCGCCAAGTTCCTGACTGAGGATGAGCGACAGTACATCATG
TACCGAATCAAGTTTGACGGCCAGTCTTCCTCCTCCGCTGTGGCCCAGGATGACTCCATG
AACTCCAAGTACCTCTGGGACGCCTTCAAGGACATCCAGACCTGGCTGCATCTCGGACTC
TTCTGGGGTATTATCTGTCCTCTTTACTCCATCTCCTTCTTCCTGCCCTCCATTATCAAG
AACCTCGGCTACACCTCCTCCAAGGCCCAGCTACTGACCATCCCCATTTACATTGTGGCT
GCCTGCTGGGGTGTGCTGCAGGCATGGCTCTCCGACCGGCTGCAGAAGCGATCTATCTTT
GTCGCCTTCAACTTGTGTTGCATGATGCTGGGTTACATTCTGGCTATCTCCATTTCTGCC
GCAGCCCACCCTGCTGCTACATATGTTGGTTGCTACCTGGCCGCATTTGGAATCTACCCT
GCCATTCCCGGTATTATCTCTTGGATCTCCAACAACGTGTCTGGATCGTACAAGCGAGCC
GTGGCCATGGCCGTGCAGATCGGTATTGGTAACCTTCTTGGAGCCGTCTCCACTAACATT
TATCGAGTGCAGGACAAGCCCCAGTACCGACTCGGACACTCCGTCAACCTGGGCTTCATC
GTCCTGGGCTTCGTGTGTCTAGTTAGTCTGCGAATCTTCTACACCCGGCAGAACACCCTC
AAGAAGGAGCGACTTGCCTCTGGCTACTACGACAGCATGTCCGAGGATGAGTTCGCCCAG
CTTGGTGATCGATCTCCTTACTTTGAGTACAAGCTCTAGCGACACCCGTCTAGTCTATTT
AGTGATTATTATCTGTTTATGTTTTATCTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28193g_CDS-001

Protein length: 513 aa.
Product: High-affinity nicotinic acid plasma membrane permease, putative

>YALI0F28193g_CDS-001 MEKTDATHIESASIEEDFKNGTQITITDPEKASGELMATAEELYPSVDKKKLLRKMDFHI
IPMLSLLYLLCFLDRGNIGNANIEGLSTDLNLTGEQYNMALTVFFFTYAPLEVPSNMLLK
KFRPSIWLPSIMVAWGLVMTLMGIVQNYGGLLATRVLLGVFEAGLFPGVAYYLTTWYCRS
ELQFRQAMFFSAASVAGAFSGLLAFAISKMRGVAGLEGWRWIFILEGIATVVVGFIAYFT
LYDYPETAKFLTEDERQYIMYRIKFDGQSSSSAVAQDDSMNSKYLWDAFKDIQTWLHLGL
FWGIICPLYSISFFLPSIIKNLGYTSSKAQLLTIPIYIVAACWGVLQAWLSDRLQKRSIF
VAFNLCCMMLGYILAISISAAAHPAATYVGCYLAAFGIYPAIPGIISWISNNVSGSYKRA
VAMAVQIGIGNLLGAVSTNIYRVQDKPQYRLGHSVNLGFIVLGFVCLVSLRIFYTRQNTL
KKERLASGYYDSMSEDEFAQLGDRSPYFEYKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG