YALI0F28215g

Overview

Description similar to uniprot|P24482 Saccharomyces cerevisiae YPR175w DPB2 epsilon DNA polymerase
Locus type CDS
Locus tag YALI0F28215g

Location

Species Yarrowia lipolytica Positions 3591551..3593531
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1981 (nuc.)
Previous locus YALI0F28193g Next locus YALI0F28237r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28215g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28215gYALI0F28215g_mRNA-001YALI0F28215g_CDS-001

Nucleotide sequence

 

>YALI0F28215g
ATGCCAGCAGTCCTCCCGATAAAGCTGAATCCATCGCAAATGCGGCCCGTGGCGTACCGG
ATCTTCTCCAAGAAGCACGGCCTCAACTTGAAATCAACAGGTCTCGAAACACTCACCGAA
ATCATAGGCAAAAACTACGGAACCGAATGGCGAGGGGCCGAGGCTGCCAAAATGATGGAG
GAGATTTGTCGACTGTGGAAGGAGCAGGAGATGGGTGTTTTTGTGGAGGGCAAGCCGCTG
CAGGAACTGTTCGATGAGATCACAGCCAGCAAGAAGGCCAAGGAAAAGGCACGAGTCCAG
GTGGTTTCCAAGAGCGTGGGATTGACTGGAGTGGAGGAAATCGAGGATCGGGAAGGAGAG
CCACAGGTGAACGTCATCAGAGAAGCAGCTCCTTCTGTGGACGTTGTGTGGAAGGAGTTC
TTCAAGGTGATTAGTGCTTTTGATCAGCCTCTTTTCCATTATAATGCCCGCCAGCAACGG
TTTGAGAAGCGGAAAACAAAACCCACATTGTTCGCCAATGCCCAATCTGCCTCTAACATG
TTTCTGACTCGTTACCATCTGGTCTACAACCGTCTATTGCGCAATGACGACACCACAGAC
CTGAAAATCACATCGATCCGATCTCTTATTGGTCGACAGGGCGAGTTTTCCATCTTCGGA
ATGCTTTCCAAGAATCCGGAGCAGAAGATTTGTTTGCAGGACGACACTGGTCGTATTCTG
CTGATCCTAGCAGCTGGTTGCAAGCCTGATCCAGGAGTATACTATCCTGAAGGCTCCTTT
GTCATCTGTAACGGTCGATACATGAAGTCAGGAGACGCCGAAGTGTTTGTGGTCATCACC
ATGGGCCCTCCTGTGGCCGAGAAACGACAGGAGACCATCACAGCATACGGAAACATGGAC
TATCTGGGACTGCATGGAAACCCCCATGGTTCTGTGGTGAGACGAATTGAACGGCAGGTG
GAAGCATCAATGCTTGCCGAAGAGAAACGCTTGGTAGATCAGAAAGTGATTGTGTTTGGT
GGAGATATGTATTTGGACAATCCTTTGACTCTCAAGGCTCTACAGAAAGTGTTTTCGACC
ATTGAGCTTGAGTTTCAGGACTCTGGAACCAAGAAGCCTCTAGCCATGGTGTTCTCAGGA
GACTTCACTAGTCAGTACCAGCCACCGCATTTGTACAAAAAGGGGTTCGACAAGTTGGAG
GAGCTTTTCAAGGAGTTCAGCAGCATTATCACTGGTGTCAAGATTATTTTTGTTCCTGGC
CAACGGGATCCTTGGACTAACACTTTCCCGACACAGAATGCAGTTGTTCCTCTGCAACCT
CTTCCAACCACCATGATTAACAGAGTCGCCAGACTATGTGGAGAGGATGTTTCAATGAGC
TCCAACCCCTGTAGAATGGCTTATCTTACACAGGATATGGTCTTCTACCGAGATGGACTC
AGTGAGCGTCTGCGAAAGTGCAACCTTCAACTTGATTCTGCCAAGGACGATTCGGACGAT
TCGGATGATGACATTGAGATTGACAACGATGAAGTAATGATCAACGACGTTGTAGTCAAC
GAGCCCGAATCGTCCTTCGACTTTGGAGAGGGGCTCAGCAACCTCACTCGACCAGTGGAT
ATCAGCACTCCTATGGCCAGCCAAGTGGGTCCTACCAACACTCTTTCAGCCAAGGAGGTG
GAGTCTCGCAAGATTGTGCGAACCATTTGTGATCAGGGTCACTTGTCTCCCTTCAACAGA
CACGACAGACCTGTTGCCTGGGACTACGACGAAACTCTATGGCTCAGTCCACTGCCTACG
ATCCTGTTTATGGTTGACACACATGCTCCGAAGTTCTCTCTCAGGTACGAGGAGTGTATG
GTGGTCAACCCTGGCCCCTTCCTGAACAGAAAGATCGCCAGCTGGGTTGAGTATGATCCT
TCCAAGAAGACAGTCAAGGAGCGACAGTTGCATATTTAGACAGTAATTCATGACCCAATA
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28215g_CDS-001

Protein length: 653 aa.
Product: Second largest subunit of DNA polymerase II (DNA polymerase epsilon), putative

>YALI0F28215g_CDS-001 MPAVLPIKLNPSQMRPVAYRIFSKKHGLNLKSTGLETLTEIIGKNYGTEWRGAEAAKMME
EICRLWKEQEMGVFVEGKPLQELFDEITASKKAKEKARVQVVSKSVGLTGVEEIEDREGE
PQVNVIREAAPSVDVVWKEFFKVISAFDQPLFHYNARQQRFEKRKTKPTLFANAQSASNM
FLTRYHLVYNRLLRNDDTTDLKITSIRSLIGRQGEFSIFGMLSKNPEQKICLQDDTGRIL
LILAAGCKPDPGVYYPEGSFVICNGRYMKSGDAEVFVVITMGPPVAEKRQETITAYGNMD
YLGLHGNPHGSVVRRIERQVEASMLAEEKRLVDQKVIVFGGDMYLDNPLTLKALQKVFST
IELEFQDSGTKKPLAMVFSGDFTSQYQPPHLYKKGFDKLEELFKEFSSIITGVKIIFVPG
QRDPWTNTFPTQNAVVPLQPLPTTMINRVARLCGEDVSMSSNPCRMAYLTQDMVFYRDGL
SERLRKCNLQLDSAKDDSDDSDDDIEIDNDEVMINDVVVNEPESSFDFGEGLSNLTRPVD
ISTPMASQVGPTNTLSAKEVESRKIVRTICDQGHLSPFNRHDRPVAWDYDETLWLSPLPT
ILFMVDTHAPKFSLRYEECMVVNPGPFLNRKIASWVEYDPSKKTVKERQLHI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG