YALI0F27687g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F27687g

Location

Species Yarrowia lipolytica Positions 3516191..3517204
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1014 (nuc.)
Previous locus YALI0F27665g Next locus YALI0F27709g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27687g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27687gYALI0F27687g_mRNA-001YALI0F27687g_CDS-001

Nucleotide sequence

 

>YALI0F27687g
ATGACCGACTCGGAATCGCCGTCTCCAGGCCACGACTCGGACACCTTTGACAGAAATGGC
AGTCCATTGAGCGACGTGTCTTCGCCGGCAGACACAAACACATCGGCCTCGAATCCGGCC
CACCCAACGGACGACTCATCACTAACCGACACCGAGGCCTCTCTCAAGGCCCAATTGGCG
GGCTTTGTCGAAGGCCTGGTCGACGACACAAACATAACCGACACAAACACATGTTCAGCT
ACCGTCGTTGCTCCTCTAATCACTGCTGCTCCCACCACCACCACCACCACCACCATCACC
GCTACTGCTAGCACCACAGTGTCCACCACAACAGCAGCAACCACGTCTATCGCAGTTGGC
GCGCCGTCTGCCTCGGGCAAGTCCCTCACCCCGGCACAAAGCCTGGCGCGAAAACTGTCG
GAAAAACCGCCCACCAAACTGTACAAGAAAACGCAGACTAACCGCCGTCGGTCCCCTCCC
GTGGCCACCAATGGCCCCATAGCCATTGCTCCCGCTCCGGTATTGCGTCCGTTGCTCCCC
AAGCCCGTGGTGCCTATCCGGCCCAAAAAGCGAGCAAAGTCCGTGGGTGGAGCGTCCGCC
AACAGCGCCGCAGTGCCCACCACGGTTGCCCCCTCGGCCGTCACACAGACACCGTCAGTC
GTGCGACGAGCCTCCAAGACAGCCTCCGCTAACACCTCCAACACCAAGGCCTCTTCCACA
GCCGCCGTCAACACGACCATATCTCCTTCGTCGTTATCGCTCCCCACAAAACGCAAGTCG
TCAGACGTGTCGACCGACTCATCGCTGGACATGATGCTGACTCCAGCAACGACTCTGGAC
ATGAGCCTCGACATGAGCCTGAGTCTGGACATTTCGCAGCCTAACTTGGACTTTTGGCCC
GACGATCTGGAATGGCAGGACTCGGGAATCACACAGCCCAAGGAGCTGAATCTGGAGGAT
ATTTTTTACGATCTAGATGAGCAAATTATTGCTTAATGTATTTATTTATAACAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27687g_CDS-001

Protein length: 332 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F27687g_CDS-001 MTDSESPSPGHDSDTFDRNGSPLSDVSSPADTNTSASNPAHPTDDSSLTDTEASLKAQLA
GFVEGLVDDTNITDTNTCSATVVAPLITAAPTTTTTTTITATASTTVSTTTAATTSIAVG
APSASGKSLTPAQSLARKLSEKPPTKLYKKTQTNRRRSPPVATNGPIAIAPAPVLRPLLP
KPVVPIRPKKRAKSVGGASANSAAVPTTVAPSAVTQTPSVVRRASKTASANTSNTKASST
AAVNTTISPSSLSLPTKRKSSDVSTDSSLDMMLTPATTLDMSLDMSLSLDISQPNLDFWP
DDLEWQDSGITQPKELNLEDIFYDLDEQIIA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG