YALI0F27654g

Overview

Description Similar to uniprot|Q03558 Saccharomyces cerevisiae YHR179w OYE2 NADPH dehydrogenase (old yellow enzyme), isoform 1, pseudogene
Locus type CDS
Locus tag YALI0F27654g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3510045..3511115
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1071 (nuc.)
Previous locus YALI0F27643g Next locus YALI0F27665g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27654g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27654gYALI0F27654g_mRNA-001YALI0F27654g_CDS-001

Nucleotide sequence

 

>YALI0F27654g
ATGGCTCTCTTTGACCTCATTGATATTGGGTGTACCCACCTACTCAATCGGGTGTCGATG
ACACCTCTTACTTTACTACTCTCTGTCCACGATGGAGTGCCTTCAAATATTCCGATACCG
TACATACTATGTTCAACGATCGCACAAATCCGGACGCAGATGACTTGGAAGCCAACTATG
TGTTTCCTGGTGCTAGACACTTTCCTTAGAGTCAGCGTCTGGACTGAGAAACAGATAAGG
CCGTGGGAAGAGCTTTTTGTCGTTCTCCATGCTAGATAGTGCAAGTTGTACGTGCCATTG
AGGGTTGTGGGACAAACTGTCAGCTACCCGGTGCTGCAGACTTTCCTGTAGTGGATCCCG
CTGCTATTGTTCAGAAGATAGATCAAGGCTGTGAGTGAGGACGAGATTAAGCAGAAGATC
TGCCATTATGCGATAGCAGCCGAAAAAGCCATTAAAGCTGAAGCCGGCGGAGTTGAAATT
CCCGAGGCTCAGGGATACTTGCCGGATCAATTCATCCACTGGAACTTCAAGGAACTGATG
AACCCATACGGAAGAAGGAATGAAAATAGATGCAGGTTCAGTTTGAATATTGTTGATGCT
GTTTCGACGGCTAGTAGGACGGCCAAGACTGTCATTCGACTTTCTCCCTGGGCTTGTGTG
CAGGATATGGCTGCTCACCAAACCAAGTCTTCGCCAACGTTCGTATTTATTTTCCGAGAA
CTCCAAAAACGAGCAGGTCATCATGGTCAGAAGCTCGCGTTTTTGCATCTTGTTGATCTC
CGGATCTAGGTATCAGTCGAAAAGAGCAGGAACAGAAAGAGTGACAAGTCCATGAGCCAT
TCAGAGAGACTTGAAAGGACCTCTAGTGGAAGCAGGAGGTTTTAGTCAGAAACCCCGGAA
GTTTGTGAGGAATACCCGTTGACTCTCGTTGCCACTGGAAGATACTTGATCAGCATTCCT
GACTAGGTCGAGAGACTCGAGAAGATGAAGATATTCACTCCGTACAACATCGACACCTTT
TACACGACACTGACAAAGAGTGCTCCACTGATTATCCTTTTATCCAAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27654g_CDS-001

Protein length: 357 aa.
Product: NADPH oxidoreductase containing flavin mononucleotide (FMN), putative

>YALI0F27654g_CDS-001 MALFDLIDIGCTHLLNRVSMTPLTLLLSVHDGVPSNIPIPYILCSTIAQIRTQMTWKPTM
CFLVLDTFLRVSVWTEKQIRPWEELFVVLHAR*CKLYVPLRVVGQTVSYPVLQTFL*WIP
LLLFRR*IKAVSEDEIKQKICHYAIAAEKAIKAEAGGVEIPEAQGYLPDQFIHWNFKELM
NPYGRRNENRCRFSLNIVDAVSTASRTAKTVIRLSPWACVQDMAAHQTKSSPTFVFIFRE
LQKRAGHHGQKLAFLHLVDLRI*VSVEKSRNRKSDKSMSHSERLERTSSGSRRF*SETPE
VCEEYPLTLVATGRYLISIPD*VERLEKMKIFTPYNIDTFYTTLTKSAPLIILLSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG