YALI0F27555g

Overview

Description weakly similar to uniprot|D5G7Y0 Tuber melanosporum GSTUM_00002628001 hypothetical protein
Locus type CDS
Locus tag YALI0F27555g

Location

Species Yarrowia lipolytica Positions 3494120..3495998
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1879 (nuc.)
Previous locus YALI0F27533g Next locus YALI0F27577g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27555g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27555gYALI0F27555g_mRNA-001YALI0F27555g_CDS-001

Nucleotide sequence

 

>YALI0F27555g
ATGATCAGAGCTACAGCCATGCACCGGTCAATTGTGCAGCGTCGCATGCTGAGCACCGCC
TCTCGGCTCCAGCAGGCCGCCAAGCCCGCTACCGGCTCCACTGTTGGAACAGCCAATGGC
GCCTCTGCTGCCTCGGGCAAGCCTCCCGGAGCCACCTTTGAGGGAGCCTCCAAGCAGAAG
AAGAAGACTCACAAGTTCCGAAACTTTGTGCTGCTCTCCACCTTTGTCGGCGCCGGCGCC
TTTGCCGGAGGTGTTTATTACTCCCTTCAGAACGACCAGTTCCAGAGCCTGTTTGTCGAG
TACGTGCCCGCGGCCGAGCACGCCATCAACTACATTGAGGAGCAGCAGCTGCGATCCGGC
CGACTCAAGATCGCGACTCCCACCTCCAAGCATGACGTTGACCAGTCCACCGTCCGAGTG
CCCAAGTCCGGTGCTACCTGGCGAGCGGTCGACTCCACCGATGCTGCTACTTCTGCCAAG
TCTGCATCTTCTCCCGCTGCCAACGTGGCCAAGGACGTCGCTTCCCCCGCTCCTGCTGCC
ACCGCCTCCCCTGTCTCTAGTGGTTCCCCCAAGACTGACAACACCACCGTGCCCGCTGTG
CGACTGGCTAACGACTCTGACCCCGCCGTCAAGGCCGCCGTCCAGACCTTCAATGATCTG
ATCGCCGTGGCCCCCTCTGGTGCCGCCAAGCAGCTCTCCGCCAAGGTCTCCACCGTGGTC
GACCAGCTGCAGCACAACGTGGCCCAGATCAAGTCTGAGGCCGCCGAGGAAGCTAAGAAC
TCCATCAACAAGCTCAACAGCGAGCTGGCCAAGCTCAAGGCTTCCACCGGCGAGGAAATC
TCGTCTAAGGTGTCTGCCGCCGAGCAGCAGCTGCGAAACGAGTTTGCCGCTCTGCGAGCC
CACTCTGAGAAGGTCTACCACGACCGTCTCCGAGTCGAGATTGAGGCCACCAAGTCCCTT
GTTTCTTCTCACGCCAACAACCTGATTCAGGCCGTCGAGGCCGAGCGACAAAAGCAGTAC
GCCCAGGAGATTGCCGAGCGAGTCGAAACCGAGCGAGAGGGCCGTCTCTCCAAGCTCAAG
GACCTCCAGACTTCCCTCACCCAGCTGCAGGACCTGGCTCTCAAGACCGAGCAGGCCGTT
GACGCCTCCGGCCGAACCGCAGCTCTGCATCTTGCCATCGCTAAGCTCACCGGTGCTCTC
AAGGGTTCCGAGCCCGTGGCCCTCGGCCCTTACGTCGAGTCCATCCGACGGGCTGCTGGT
GACGATCCTCTGCTGCAGGCCGCTCTGGACTCTATTCCCGAGGTCGCTCAGACCGAGGGA
GTTCTTACCCCTGCCCAGCTTACCATTCGATTCAAGCTGCTCGAGCCTGAGCTACGAAAG
TCCTCTCTGGTTCCTGTTAACGCCGGTGTCGCCGGTCATCTGGGCTCCCTCATTTTCTCC
TCTCTGCTGTTCAAGAAGAGCGGAGTGCCCAAGGGAGACGACGTCGAGAGTGTGCTTGCT
CGAGCCAACATTGCTCTGGAGCAGGGCAAGCTATACGACGCCGTGGCTGAGGTCAACACT
CTCAAGGGATGGCCCCGAAAGCTGGCCTCTGACTGGCTGGACGAGGGTCGACGACGAACC
GAGATTGAGTTCCTCGCCGACGTCATTGCCGAGGAGGGCAAGCTGTACGGAGCTCTTTCT
AGCAAGAAGTAGACGGAAGGGAAAATATACAATAGATTTTGATTATGACGGAAAGAGTGT
ATATATTAAGCGGGTGGGCAGACATGAACATTTGGAGAGCTTGTGCACATGCCCGTTGAA
TATGCGATGAAAGCTGACGCCCGATTGGTATGTAGGCCGGTCATAGCAGCGCAGTTCTAA
TGAATGCATAGCAACTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27555g_CDS-001

Protein length: 564 aa.
Product: Conserved hypothetical protein

>YALI0F27555g_CDS-001 MIRATAMHRSIVQRRMLSTASRLQQAAKPATGSTVGTANGASAASGKPPGATFEGASKQK
KKTHKFRNFVLLSTFVGAGAFAGGVYYSLQNDQFQSLFVEYVPAAEHAINYIEEQQLRSG
RLKIATPTSKHDVDQSTVRVPKSGATWRAVDSTDAATSAKSASSPAANVAKDVASPAPAA
TASPVSSGSPKTDNTTVPAVRLANDSDPAVKAAVQTFNDLIAVAPSGAAKQLSAKVSTVV
DQLQHNVAQIKSEAAEEAKNSINKLNSELAKLKASTGEEISSKVSAAEQQLRNEFAALRA
HSEKVYHDRLRVEIEATKSLVSSHANNLIQAVEAERQKQYAQEIAERVETEREGRLSKLK
DLQTSLTQLQDLALKTEQAVDASGRTAALHLAIAKLTGALKGSEPVALGPYVESIRRAAG
DDPLLQAALDSIPEVAQTEGVLTPAQLTIRFKLLEPELRKSSLVPVNAGVAGHLGSLIFS
SLLFKKSGVPKGDDVESVLARANIALEQGKLYDAVAEVNTLKGWPRKLASDWLDEGRRRT
EIEFLADVIAEEGKLYGALSSKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG