YALI0F27533g

Overview

Description weakly similar to uniprot|P60010 Saccharomyces cerevisiae YFL039c ACT1 actin
Locus type CDS
Locus tag YALI0F27533g

Location

Species Yarrowia lipolytica Positions 3492321..3493667
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1347 (nuc.)
Previous locus YALI0F27511g Next locus YALI0F27555g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27533g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27533gYALI0F27533g_mRNA-001YALI0F27533g_CDS-001

Nucleotide sequence

 

>YALI0F27533g
ATGACTACAACAGCTCCAGCCCCCCAGGTGTATGGAGGCGATGAGGTGGCGACCCTGGTG
ATCGACACCGGGTCGTCGTACACTCGAGTCGGATACGCCGGAGAAGATACCCCCAAACTG
GTGGTTTCCACAGAGTGTGGACTGATGGCAGACGAGGATGTCGAGATGGAGGACGATACA
AGCAACACAACCAAAAAATTAAACAAGTACAAGGTTGGCGACTCCGCCAATCTGCCACTG
CCCAACATGGAGGTGCTTCATCCTCTTACCGACGGGATTGTGGCTGATTGGGACGCGGTG
CAGAATATTTGGGAATACTCGCTGGCTCGACTCAATGCCGACACAAAGACACACCCATTG
ATGCTGACGGAGCCGTGCTGGAACACGCAGGCCAACAAGCTCAAGGCGCTTGAAATCGCG
TTCGAGAGCCTCGAGGTCCCGGCATCGTACTTGGTCAAGGACGCTGTGGCTTCTGCGTTT
GCTGCAGGAAAGGGAAACGCACTGGTACTGGATGTAGGATCTGAAGTGGCTTCTGTGACA
CCTGTCATTGATGGATTGGTGCTTTACAAGCCCGCGCGACGGTCACAGTACGCTGGAGAC
TATTTGGATAGACAGATTAAAAAGGTGCTTGTTTCACGAGGAATCGATCTCACTCCTCGG
TTCGAGATTAAGAACAAGAAGGCTGTGGAGATGGGTGAGCCACCTGTGTTCACCAAGCGG
GAGCTTCCCAACGTCACTCATTCCTTCACTGATCTGCAGGTGTCTCGTATTCTCTCTGAG
TTCAAGGACTCCATGTGTCAGGTGAACGATGTTCCCCTGACTCCAGAAATCTCTGGTGAA
GCCGCCGACCGGGTCTTCGAGTTCCCCACGGGCTACAGCACAACTTTCGGAGCAGACCGT
CTGTCTACTTCTGAGAGCTTATTCAAGCCCAGTGAGTACCCTTTTGACGGAGAGACTGTG
CCAGATACTGCGCGGGGACTCAGTGAGATGGTGGTGGACACAATCAACGCTTCCAACGTG
GATGTGAGGGCTCACCTGGCTAACAACATTGTTATCACTGGTGGAGGGTCGCTGGTTCAG
GGTCTCAGTGATAGAGTCAGTAAGGACGTGACCCAGGCCCTGAGTGGTCTTAAGGTCCGA
GTTGCTGCTGCTTCCAACCAGGAGGAGCGACGACACGGTGCTTGGATTGGCGGTTCTGTT
TTGGGCAGCCTGGGATCGTTCCATCAGCTGTGGGTCAGCAAACAGGAGTGGCAGGAGAAG
GGAGGAGACTATTTGGTCGAAAAGAAGCGGTTCAAGTAAAGGACTAGAACTAAGATTGTA
TAGATGGAATGTATTATTTAATGGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27533g_CDS-001

Protein length: 433 aa.
Product: Conserved hypothetical protein

>YALI0F27533g_CDS-001 MTTTAPAPQVYGGDEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDT
SNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLARLNADTKTHPL
MLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVT
PVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFEIKNKKAVEMGEPPVFTKR
ELPNVTHSFTDLQVSRILSEFKDSMCQVNDVPLTPEISGEAADRVFEFPTGYSTTFGADR
LSTSESLFKPSEYPFDGETVPDTARGLSEMVVDTINASNVDVRAHLANNIVITGGGSLVQ
GLSDRVSKDVTQALSGLKVRVAAASNQEERRHGAWIGGSVLGSLGSFHQLWVSKQEWQEK
GGDYLVEKKRFK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG