YALI0F27511g

Overview

Description similar to uniprot|Q9P3U4 Schizosaccharomyces pombe molecular function unknown
Locus type CDS
Locus tag YALI0F27511g

Location

Species Yarrowia lipolytica Positions 3490411..3492025
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1615 (nuc.)
Previous locus YALI0F27489g Next locus YALI0F27533g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27511g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27511gYALI0F27511g_mRNA-001YALI0F27511g_CDS-001

Nucleotide sequence

 

>YALI0F27511g
ATGACAGACACAGACGAGTCGTCGCAATTCGACGAAGAGTCTTACCCCTCGGACGGGTCT
CTGGACTACGACAGCGAGGACCAGGACATGGAAGACTCGCAGTTTTGGGAAGAAGATGAG
GAAATGGAGCCCTCAAGCGACAACTTTGGCGCCATGTCTCACAGCGAGGCCATCCAAGTC
GACCACACGGCTCTGGCTGCCAGCAGTCAACGGGTGCTGGAACCCGAAGATCTCCTCAAG
GGCCAGGCAGCCGACGTGGCACGTGTTTCGGAACTCACGGCTCTGGAACCGTGGCGAGCA
GAGCTGCTGCTATGGAAAGATGACTGGAAGGTGGACCATGTGATCACAAAGTACCTGGAG
CAAGGCGAAAAGGTGCTGCGAGAAGCTGGCATGTTAAGTGACGATCCTGTGGAGTTTGTC
ATTTCTAAGCCTAGGCCCGATTTCATGTGCTTTCTGTGCTGCGACGAAGACAAGGCTACG
TCATTCAAGCTGGCTTGTGGTCACGAATGTTGCACTGAATGCTACTCTCATTACCTGCGT
GGAAAGATTCAGGAAAACGGCTCGCTGGATATCACCTGTCCCATGAACTGCAAAGAGATT
GTACCCAAGCCTGCCGTCATGCTTCTGACTGACAAAAAGCTGCAAGCCAAGTATCAATCC
ACTCTGTGCACCCGGTATGTTCGTGCCCACAATGACATGAAATGGTGTCCCGCGCCAGAC
TGTGGCAAGGCCGTCAAGGCCAACATCTCCGTCACAGATGAATCCGTCATCCCCATTGCA
GAGTGCAACTGTCACCAACAATTTTGTCTTGCCTGCAATATTGACGAAGACCATCTACCA
TGTCCTTGTAAGGTTGCAGCTCGATGGCTCGAAAAGCTGCGGGATGAGTCTGAAACCATG
ACGTGGATGTCTGTCAACACAAAGCCCTGTCCCAAGTGCACTAATCCCATTGAGAAGAAT
GGAGGATGCAACCACATCAACTGTACTCAGTGTGGCAACCACTTTTGCTGGGTGTGTTTA
GGAGACTGGGCCAAACATGGCTCCTCAAACTATCAGTGCAACATGTACTCTCCCGAGCAG
GCCGAGGAGGATCAGAAGAGCGTCAATGCTAAGCGAGAACAGCTTGACAGATATATGTTC
TTTTACACGCGGTACAACAATCATCGAGACAGTGCCAAGCTGGACGAAAAGACGTACAAG
AACATTACTAAGACAATGGAGACGCTGCAGAAGGAAGGCAAAATGACATGGCTGGAGTCG
CGGTTCCTGCCATCGTCGTTCGAGATTCTCAGACAGTCTCGGCAGACGTTGCTGTGGACC
TATGCGTTTGCATTTTTCTTGGACGCCCAGCCGGAGCGGGAAATCTTCCTCAAGAACCAG
GAGGATCTTGAGCTGCACACCGAGGGGCTGTCAGAGCTGTTTGAGTACAAGTGGGACAGG
ATTCCGGGAGCCAAGGTCAACTTTCTGGACAAGTGCTCGTACCTCAAGTCCCGACGTCAG
AAGCTTGTCGAGCATGTCATGAAGGGTATGGAGGAGCGCAACTGGAAGTTTTTGAACTGA
TCATGGGATTAAGCATTGAGATAACTGCAAATAGGAATAGCATATTTATTATTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27511g_CDS-001

Protein length: 520 aa.
Product: Conserved hypothetical protein

>YALI0F27511g_CDS-001 MTDTDESSQFDEESYPSDGSLDYDSEDQDMEDSQFWEEDEEMEPSSDNFGAMSHSEAIQV
DHTALAASSQRVLEPEDLLKGQAADVARVSELTALEPWRAELLLWKDDWKVDHVITKYLE
QGEKVLREAGMLSDDPVEFVISKPRPDFMCFLCCDEDKATSFKLACGHECCTECYSHYLR
GKIQENGSLDITCPMNCKEIVPKPAVMLLTDKKLQAKYQSTLCTRYVRAHNDMKWCPAPD
CGKAVKANISVTDESVIPIAECNCHQQFCLACNIDEDHLPCPCKVAARWLEKLRDESETM
TWMSVNTKPCPKCTNPIEKNGGCNHINCTQCGNHFCWVCLGDWAKHGSSNYQCNMYSPEQ
AEEDQKSVNAKREQLDRYMFFYTRYNNHRDSAKLDEKTYKNITKTMETLQKEGKMTWLES
RFLPSSFEILRQSRQTLLWTYAFAFFLDAQPEREIFLKNQEDLELHTEGLSELFEYKWDR
IPGAKVNFLDKCSYLKSRRQKLVEHVMKGMEERNWKFLN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG