YALI0F26411g

Overview

Description highly similar to uniprot|P43588 Saccharomyces cerevisiae YFR004w MPR1 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0F26411g

Location

Species Yarrowia lipolytica Positions 3381240..3382427
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1188 (nuc.)
Previous locus YALI0F26389g Next locus YALI0F26433g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26411g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26411gYALI0F26411g_mRNA-001YALI0F26411g_CDS-001

Nucleotide sequence

 

>YALI0F26411g
ATGGAGCGATTTCAGCGAATGCTACAGACCGGGGGCCTCGGTGGTCCCGGTGTTGGAGGA
GGTGTGAGTATGATCGGAGCTGGATGGTTTGATTATGTCCAGGAATTGGAAACGACTCAT
GAAACATAGTACTAACAACAGGATGGACCTGTGGTCGACAACTCAGAGACTGTCTACATT
TCCTCATTAGCTCTTTTGAAGATGCTGAAGCATGGACGAGCTGGTGTCCCCATGGAAGTG
GTGAGTATGCAATGAACGCGGTGCTATTCGACAATGGCTGTTGTACGCCACAACGTGGTG
ACAATGGTGGCAACAGCAGATCGAGGGGGATGGGTTGAACGAATCAATACTAACAACAGA
TGGGACTTATGCTGGGAGAGTTTGTGGACGACTACACAGTTCATGTCATTGATGTGTTTG
CCATGCCCCAGAGTGGTACTGGTGTCTCCGTTGAGGCCGTTGATGATGTGTTCCAAACAC
GAATGATGGATATGCTTAAACAGACCGGTCGAGATCAGATGGTCGTCGGATGGTACCATT
CACATCCCGGTTTCGGCTGCTGGCTGTCGTCTGTGGATATCAACACCCAACAATCGTTTG
AGCAGCTCAACAAGCGAGCAGTGGCAGTGGTGGTGGATCCCATTCAGTCGGTCAAGGGTA
AGGTTGTAATTGACGCCTTCCGACTGATTAACACAAACTCGGTGCTTTTGGGCCAGGAGC
CTCGATTGTCGACCTCCAACGTGGGTCATCTTAACAAGCCCACAATCCACGCCCTGATCC
ACGGCCTGAACCGACACTACTACTCCATTAACATCAACTACAAGAAAACTCCCCTGGATG
AGAAGATGCTGCAGAACCTGCACAAGAGCAGTTGGACCTCTGGTCTGGAGATCCAGAACT
ACGAGACCCAGGAGTGCAACAACGCCAACGCTGCACAGAAGATGGTCAAACTGGCCATTG
AGTACACCAACCGAGTGCAGGAGGAGCAGGAGATGACCGAGGACCAGCTCAAGACTCGAT
ATGTCGGAAAGCAGGACCCCAAGAAGCATCTTGAGGATGCTGTTACTGATAGACTGGAGG
AGAACATTGTTTCTCTCATGGCTGGAAACGTCGACAACGTTGCTTTCCAGGCGTAGGTGG
TTTGTACTAGGTAGTGCATTATATAAATAAATTAAACGGTTCATGTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26411g_CDS-001

Protein length: 313 aa.
Product: Metalloprotease subunit of 19S regulatory particle, putative

>YALI0F26411g_CDS-001 MERFQRMLQTGGLGGPGVGGGDGPVVDNSETVYISSLALLKMLKHGRAGVPMEVMGLMLG
EFVDDYTVHVIDVFAMPQSGTGVSVEAVDDVFQTRMMDMLKQTGRDQMVVGWYHSHPGFG
CWLSSVDINTQQSFEQLNKRAVAVVVDPIQSVKGKVVIDAFRLINTNSVLLGQEPRLSTS
NVGHLNKPTIHALIHGLNRHYYSININYKKTPLDEKMLQNLHKSSWTSGLEIQNYETQEC
NNANAAQKMVKLAIEYTNRVQEEQEMTEDQLKTRYVGKQDPKKHLEDAVTDRLEENIVSL
MAGNVDNVAFQA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG