YALI0F26433g

Overview

Description similar to uniprot|P15179 Saccharomyces cerevisiae YPL104w MSD1 aspartyl-tRNA synthetase
Locus type CDS
Locus tag YALI0F26433g

Location

Species Yarrowia lipolytica Positions 3382736..3384788
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2053 (nuc.)
Previous locus YALI0F26411g Next locus YALI0F26455g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26433g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26433gYALI0F26433g_mRNA-001YALI0F26433g_CDS-001

Nucleotide sequence

 

>YALI0F26433g
ATGCTAAGAGCAGTTAGGCGGATTCCCCGGAGTGTGGGGGGCACACTTGCGGCAACCATT
CGACACAAATCCACCGGTCTGAAGTTCCCAGCTTCTGAAACCGTCGTAACCAAGTTTTCG
TTTCCTAGTCGAACCCATTCCATCACCGGTCTTCTCAAAGATGCTCCTGCGCTGGAGCAG
AGCCAGAAGAAGGTCACTCTGCAGGGCTGGATCCACAAGAAACCCCGAAAGGTATCCAAG
AACCTCACTTTTGCATCCCTGAGAGATACTAACGGAGATATCATCCAATTGGTGGATTCC
AACAGTCCTTCGATGCTTCGATCTATGAAGCCTGAGAGTGCAGTGGTCGTGGAGGGTGTG
GTTGCGAAGCAGAGAACCGCCAAGAAGGGAGTGTTTGATCTAGTGGTTTCTTCTTCCTCT
GTGCTCAATGAGGCCAACGAGAAGGGGAGTCAGCTGACTCTGGGTGATACAAAGGATTGG
CCTGCAGAGTACCGATACCTGCAATTGCGACAACCCCAGCTTCAGGCTGCTCTCAAGCTT
CGAGCCAACGCCATGAGGGCCTCTCGAAGCGTTCTGGATAATCTTGGGTTCACAGAGGTC
GAGACTCCTCTACTTTTCAAATCCACTCCCGAGGGAGCTCGAGAGTTTCTGGTGCCCACA
AGAAAGCGAAACCTCATGTACGCTTTGCCTCAGAGTCCGCAGCAGTATAAGCAGCTGCTG
ATGGCTTCTGGTGTTCATAGATACTATCAGTTGGCGAAGTGTTTCCGTGATGAGGATCTG
AGACAGGATCGGCAGCCTGAATTCACCCAGGTCGATATGGAGATGGCTTTTGCCAATGGA
GCTGACGTGCGAGAGGTTGTAGAGAAGCTCGTGCTCAAGATCTTCGCCGATACTGTGAAC
AAGAACATCTACACTCTTGATGCTAATGAAAACCTTGTGCAGCAGTCCACTTTCAATCCC
ATGACTTTCAAAGAGGCTCTGGGCAAGTACGGTATTGACAAGCCAGATCTCAGATACACT
TGTGCCATTACCGATGTCTCTGAGCATGCCACCTCCTTTAATGAGGACTTCCCCGTGTGT
GAGATTCTGCACGTCACCAAGGAGAATGCTCCTGAGTCTCTCGACTTCCTATCTGAGGCT
CGACAGTACACTAACCGAATTCCCGACGTGATTCAAATAACTGAGGAGAACCTTTCGTCC
TGGAACCAGCAAGTTTCTCAGTTTAAACTTGACAAGACACTTCCTGTTTCAGTTGGAGAT
GTTGTCCTTGCTTCTACTAGACAAACTACCTCATACGAGAATCCCACTCCTCTTGGACGT
GCGAGACAGTTACTGATCAAGGAGTACCCTGAGAAATGGCGACGCCAATTGGCTTCTGGG
GAGCAGCTTCCCTCAATTGAAGACACCTTTGTGGCCTCTTGGGTCATTGACTTTCCTCTC
TTCTCTCCTAGCTCGATGGACTCTGATCCTGAAAAATCGCAGCCCTTCCCCAAGTTTGAC
TACACTCAGATTGTGGCCTCCCATCATCCTTTTACCATGGCTGTTCTTGAAGACTACCCC
CTTCTGGAAACGGATCCACTGAAGGTCCGAGGTCAACACTATGATCTAGTCCTCAACGGC
GTTGAAGTGGGGGGTGGGTCTACTAGAGTCCACGATTCGCAGCTGCAGAACTACATTTTC
AAGGAGATTATGAAGATCCCCAACTCTGAGAAGCTTTTCGGACACTTGTTGCGAGCCTTT
GATGTGGGATGTCCCCCCCATGCTGGTTTTGCTATCGGTTTTGACCGTTTGGTCGCAATG
CTTGCAGGTTACTCGTCTATTCGAGATGTCATCGCCTTTCCTAAGACCGTCACTGGGGCT
GACCCCATGATTGGCAGTCCATCTGCTGCCACCTCGGCGCAGCTCGCTCCTTACCATGTT
CGAGTTGCTCCCAAGGAAAACAAGGAGTAATTTGAGATGTACAAGCATGATGCTCCTGTT
CAAAATAAATGTGTGCTTGTACAGTACAAGTACAAGTATTTGTATATAGTAATAGAACTT
TTAGTTATTCGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26433g_CDS-001

Protein length: 650 aa.
Product: Mitochondrial aspartyl-tRNA synthetase, putative

>YALI0F26433g_CDS-001 MLRAVRRIPRSVGGTLAATIRHKSTGLKFPASETVVTKFSFPSRTHSITGLLKDAPALEQ
SQKKVTLQGWIHKKPRKVSKNLTFASLRDTNGDIIQLVDSNSPSMLRSMKPESAVVVEGV
VAKQRTAKKGVFDLVVSSSSVLNEANEKGSQLTLGDTKDWPAEYRYLQLRQPQLQAALKL
RANAMRASRSVLDNLGFTEVETPLLFKSTPEGAREFLVPTRKRNLMYALPQSPQQYKQLL
MASGVHRYYQLAKCFRDEDLRQDRQPEFTQVDMEMAFANGADVREVVEKLVLKIFADTVN
KNIYTLDANENLVQQSTFNPMTFKEALGKYGIDKPDLRYTCAITDVSEHATSFNEDFPVC
EILHVTKENAPESLDFLSEARQYTNRIPDVIQITEENLSSWNQQVSQFKLDKTLPVSVGD
VVLASTRQTTSYENPTPLGRARQLLIKEYPEKWRRQLASGEQLPSIEDTFVASWVIDFPL
FSPSSMDSDPEKSQPFPKFDYTQIVASHHPFTMAVLEDYPLLETDPLKVRGQHYDLVLNG
VEVGGGSTRVHDSQLQNYIFKEIMKIPNSEKLFGHLLRAFDVGCPPHAGFAIGFDRLVAM
LAGYSSIRDVIAFPKTVTGADPMIGSPSAATSAQLAPYHVRVAPKENKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG