YALI0F26389g

Overview

Description similar to uniprot|P61965 Mus musculus Wdr5 repeat- containing protein
Locus type CDS
Locus tag YALI0F26389g

Location

Species Yarrowia lipolytica Positions 3379977..3381178
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1202 (nuc.)
Previous locus YALI0F26367g Next locus YALI0F26411g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26389g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26389gYALI0F26389g_mRNA-001YALI0F26389g_CDS-001

Nucleotide sequence

 

>YALI0F26389g
ATGACGACGGATTTCGGCGGTGGCACAAAAAAAGTGAGAACCGAGCAGGAGGAGGACCTG
GCGTCGGAGTTTCCTACGAAGCTCACGATAGACGCTCACTCCGCACCCTGCACGACGGCA
AAAATCAGCCCAAACGGCAAACAGATTGCAACATGTTCTGCAGACGCGTCTATAAAGCTG
TGGGACGCTGCTACTGGAGACCTGATACAGACGCTGAGAGGTCATCGAGCGGGAATCAAT
GACATCAGCTGGTCGCCTGACTCGAAGATGCTCGCCACAGCTTCCGACGATCGAACGATC
CGAATTTGGTCCACACACCGACCTTCCAGTCAGCGTATCCTAGTGGGACACACCCACTAT
GTGACATGCGTCAAGTTCAATTATAAGGGCAACCTAGTGGTGTCCGGATCAGCCGATGAG
AATGTCCGAGTGTGGGACGTGCTTCAGGGTCGGTGCATCATGACCCTGGCGGCCCACTCA
CAACCCATCTCGGCGGTCGACTTCTCATGCGAAGGAACCATGATTGTCAGTGGATCACAT
GACGGTCTTATCCGAATGTGGGACACTGCCACTGGCCAATGTTTGAAAACAATTGTCGGT
GAAGAATCTTCACCCATCATGTTTGCCCGCTTCACTCCAAACTCCAAGTTCATCCTTGTC
TCTAATATGGACTCCACTGCAAGGTTGTGGGACTACATGAACAATAAGGTGGTCAAGACA
TACAAGGGCCACGAGAATGGCAAGTACTGCTGTCCCACTGGCTTTGTGTATCGTCAGGAT
CGAGCCGTCCTTTTGCATGCCTCTGAGGACGGTCGCGTCTACGTGTACGATATACAGGAT
CGAACTGTGCGGGGCTCGTTTGACGCTCATCCGGGAGTTATTATTTCACTGGATGTTATT
GATAACAAAATCGTTACCTGTTCATTAGATGGCTCAGTGAAGCTGTTTGAGCTGGTGGAA
GAGAACAGCCCAAGTGACGACATGGATACTGATACCGAGGAGAATGGCTGCCGAACCAAT
AGCAGTGAGGAGCGGGACAACAGCAGAGAAAAGGAGGACGGCAATGGAGATGGTCATGGA
GATGTTAGCATGAACAACGACTAGCACTGAATATGGTGCTTAAAACAACACGAAAGGTGC
TGTCTACTACAAGCACACAGCATCTACGAATAAGTAATATAGAATAACAGCATAATGACT
AA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26389g_CDS-001

Protein length: 368 aa.
Product: Conserved hypothetical protein

>YALI0F26389g_CDS-001 MTTDFGGGTKKVRTEQEEDLASEFPTKLTIDAHSAPCTTAKISPNGKQIATCSADASIKL
WDAATGDLIQTLRGHRAGINDISWSPDSKMLATASDDRTIRIWSTHRPSSQRILVGHTHY
VTCVKFNYKGNLVVSGSADENVRVWDVLQGRCIMTLAAHSQPISAVDFSCEGTMIVSGSH
DGLIRMWDTATGQCLKTIVGEESSPIMFARFTPNSKFILVSNMDSTARLWDYMNNKVVKT
YKGHENGKYCCPTGFVYRQDRAVLLHASEDGRVYVYDIQDRTVRGSFDAHPGVIISLDVI
DNKIVTCSLDGSVKLFELVEENSPSDDMDTDTEENGCRTNSSEERDNSREKEDGNGDGHG
DVSMNND*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG