YALI0F26367g

Overview

Description similar to uniprot|P36100 Saccharomyces cerevisiae YKL028w TFA1 large subunit of transcription factor TFIIE
Locus type CDS
Locus tag YALI0F26367g

Location

Species Yarrowia lipolytica Positions 3378639..3379839
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1201 (nuc.)
Previous locus YALI0F26345g Next locus YALI0F26389g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26367g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26367gYALI0F26367g_mRNA-001YALI0F26367g_CDS-001

Nucleotide sequence

 

>YALI0F26367g
ATGGACAACATCAAGCGGCTCCTCCAGTACGTTACACGAGGCTTTTACGACACAAAGTCC
ATCCTGGTGATGGACGCGCTGCTCAAGCATGTGGTGCTTTCAGACGAGGAACTGCACCAG
CTGCTGAGCATTCCGGCCAAGGAGATTCGACAGATTTGCGCAAAGCTCAAGGACGACAAG
CTGCTCAAGGATCACACCCAGCGCGAGCAGCAGGAAAACACATACGGCTACAACAAAAAT
TACCAAAAGACGTACTACTACATCCACTACACTGTGACTATCGATGCCATCAAGTGGAAG
GTGCACTCCATGAACAAGCAGGCAGAGGAGGCGCTTGGAAAGAAATCCCAGCCACAGGGA
TACGTGTGTCCGCTGTGTACCAAAAAGTTCACTACCCTCGAGGCCGTCACCAACGTGCAA
ATGGACGGCACTTTCACCTGTGATGTCTGTTCTACCGTGATTGTCGAAGATACCACCAGT
GACGAATCCAGAGTGCACCAGGACCGACTGGAAAAGCTCATGCAGCAAATCAAGCCCATT
ATAGACGAGCTACGAAAGATAGACGACATCCAGGTGGCCGAAAACACCTTTGAGACGTCG
CTTGCCAAGGCGGTTCCCGCACAGCTGGAGGTCACTGCAGGAAGCACCTCTTCTATCAAG
ACTGCTGGCAGAGGCACTACTTCGTCCCAGACGGGCTCCAACAAAAGCTCCACTCTCACC
GTCAACCTTTCCACGGGTGCAGAGGACGAGGCTGCCCAGCGAGATGAGAAGGCTAAGCTG
GCCGAACAGAACGCCCTTCCCGCATGGTACATGGAGTCTACTGTTGGTCGACAGATGGTA
ATGGGGGATACCGACCAGGAGCAACATGGATTCACAGAGATTGGTAACGACGATGACTAT
CCCCAGAAGAAGGATACAAAGGAGGGTGTTAAAAAGGAGGAAGTGGCTCCCAAGGTCAAG
GCCGAGGATATGGAGCCCAAGCTCGAGGAGGAGGAAGAGGACGCTCTGGCCGCATACTAC
AAGCAATACGAAGCCAAGCAGCGTGCCGAGGATGAGGAGGAGGAAGATGAGGAAGATGAC
GACGATGATGAGGGTGATTTTGATGATGTTGAGCTGGCTGTTGAGGAGGCTGACTTTGAC
GAGGAGTAGACGAAGAAAAACTACAGGTGATGTACATATAACAAAGATTTTTTATACACA
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26367g_CDS-001

Protein length: 383 aa.
Product: TFIIE large subunit, putative

>YALI0F26367g_CDS-001 MDNIKRLLQYVTRGFYDTKSILVMDALLKHVVLSDEELHQLLSIPAKEIRQICAKLKDDK
LLKDHTQREQQENTYGYNKNYQKTYYYIHYTVTIDAIKWKVHSMNKQAEEALGKKSQPQG
YVCPLCTKKFTTLEAVTNVQMDGTFTCDVCSTVIVEDTTSDESRVHQDRLEKLMQQIKPI
IDELRKIDDIQVAENTFETSLAKAVPAQLEVTAGSTSSIKTAGRGTTSSQTGSNKSSTLT
VNLSTGAEDEAAQRDEKAKLAEQNALPAWYMESTVGRQMVMGDTDQEQHGFTEIGNDDDY
PQKKDTKEGVKKEEVAPKVKAEDMEPKLEEEEEDALAAYYKQYEAKQRAEDEEEEDEEDD
DDDEGDFDDVELAVEEADFDEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG