YALI0F26345g

Overview

Description weakly similar to uniprot|P80428 Saccharomyces cerevisiae YJL081c ACT3 actin-related protein
Locus type CDS
Locus tag YALI0F26345g

Location

Species Yarrowia lipolytica Positions 3377257..3378593
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1337 (nuc.)
Previous locus YALI0F26323g Next locus YALI0F26367g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26345g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26345gYALI0F26345g_mRNA-001YALI0F26345g_CDS-001

Nucleotide sequence

 

>YALI0F26345g
ATGCCGTCACTAACGCCCCCCACAGCCAACGGAGCCGTCCAATCGTCGTCGGACGAAGTC
ACGTCCATCGTCATTGAGTGCGGCTCGTCATACACGCGTGTCGGCTTCTCGGGAGACGAC
CTCCCCAAGGTGGTCATCCCCACCAAATACGGCAAGTACACAAACGACAAGGGCGAAGAT
GTGTACGAATTCGGCCTGGAAAACGTGCATCGACCTGTAGCCGGCAAGGAAATCTACAGC
CCCGTGCAGGACGGTTGCATCCAGGACTGGGATGGAGTGGCCAAGCTTTGGGAGTACGCC
ATCAAGGAAAAGCTCAAGGTGGACGACTTGAGCGAGTACCCTCTGGTGATCACAGAGCAG
ATGTGGAACTCGAGTGCAAGACGGGCCAAGATCGCCGAAATGTGCTTCGACAAGTTCCGG
TCGCCTGCCATCAGCTTCGTGAAGAACCCTCTCTGTACTGCTTACGCTGCCGTGCGACCC
AACTCCATCATTGTGGAGATCGGTTCGGCCGTGGCCAGTGTGTCTACCGTACTTGACGGC
AATGTGGTAACCAAGGCCTCTTTCCACTCCAAGTTTGGAGGCGACTTTCTCAACTACCTG
ATTCTCGAGGAGTTCAAGCGAAAGCAGGTCGAGGTCATCCCCTCGTACCTGGTCAAGAAG
AAGAAGGACATTAACGACCCCAACCCTTCTACATTCCTGCGAGAACTGCCCGGCATGACT
GACTCGTACAAAAACTTTGAGATTGAGCGGGTGCTCGACAACTTCAAGGAAACCACCCTC
CAGGTCAACTACCACCCCATCATGCCTCACACACCGCTGCCACCCAACATCCAGAGACCC
TACGAATTTCCCGACGGAAGCACATACATTGCTGAGCAGGAACGATTTGGAATCGCCGAG
TCGCTGTTCAGGCCCGTCGAGTTTGGACCCCCAGGTGTCGTGCCTGAGGGAACTCTCGGT
ATCTCGGAGCTCATCTACCATGCCGTGCTCAAGACCGACCCCAAAGCCGAGGTCCAGATG
GAGCTACTTAACAACATTGTCGTTGTTGGAGGAACTACTCTGCTCAACGGTCTGACTGCC
CGAATCCACCGGGACATGGCCCAGTTCTTCACCCAGTTCCATGTCAAGCAGCCCTACCTC
TCGGTGACCTCCACCGAGCGAAAGTCGCTGGCATGGACCGGTGCCTCTGTTTTCGCTTCT
CTCGGCAACTTTGGTTCTTCCTGGGTCATCAAGCAGGAGTATGAGGAACAGGGCGCCGAT
GTCATTGACAAGCGTTTCAAGTAGAGTAGCTGTAGCTAACGTGTATTATAATGGTATTGG
ATGTTTTGAATCATGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26345g_CDS-001

Protein length: 428 aa.
Product: Conserved hypothetical protein

>YALI0F26345g_CDS-001 MPSLTPPTANGAVQSSSDEVTSIVIECGSSYTRVGFSGDDLPKVVIPTKYGKYTNDKGED
VYEFGLENVHRPVAGKEIYSPVQDGCIQDWDGVAKLWEYAIKEKLKVDDLSEYPLVITEQ
MWNSSARRAKIAEMCFDKFRSPAISFVKNPLCTAYAAVRPNSIIVEIGSAVASVSTVLDG
NVVTKASFHSKFGGDFLNYLILEEFKRKQVEVIPSYLVKKKKDINDPNPSTFLRELPGMT
DSYKNFEIERVLDNFKETTLQVNYHPIMPHTPLPPNIQRPYEFPDGSTYIAEQERFGIAE
SLFRPVEFGPPGVVPEGTLGISELIYHAVLKTDPKAEVQMELLNNIVVVGGTTLLNGLTA
RIHRDMAQFFTQFHVKQPYLSVTSTERKSLAWTGASVFASLGNFGSSWVIKQEYEEQGAD
VIDKRFK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG