YALI0F26301g

Overview

Description some similarities with uniprot|P38356 Saccharomyces cerevisiae YBR290w BSD2 metal homeostasis protein
Locus type CDS
Locus tag YALI0F26301g

Location

Species Yarrowia lipolytica Positions 3374039..3375314
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1276 (nuc.)
Previous locus YALI0F26279g Next locus YALI0F26323g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26301g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26301gYALI0F26301g_mRNA-001YALI0F26301g_CDS-001

Nucleotide sequence

 

>YALI0F26301g
ATGACTCGACACAGCATGGAATCCAACGACTCGAACGACGTGTTATTCGACGCGCCCTCC
AGTCCACGTGACGCTCTGGCTGCGGCTTTTGGAAGCGACTCAGATTCGGACTCGGATGAT
GAACATCATCTCCAGAGCGGAGGACGGATGGGACGTAGCTACAACCAGGTCGACACCAGC
ACACAAGATGATGACGACGACCTGAACCATGACGACGATGGAGGAGCTACTCTGGAGGAG
CTGGCGCAGACGGAAGACCCCCAGTACGACAGAAGCAACTATGCAGACGACCGGTTAGGG
GGCTCCAACAACAACGGAGGCCATACCCGGATCCCTGGAGGTTTTCCTGAAGCTGGAAAC
ACCGGTTCTGGATCGGGAGGCAACGCTGGCTCCGGGTCCGAGGGCTCCAACGTGTTTTCT
ACCGGCTTCTTCAACCGTCTATTCAACAGAGGTCAACTGCTGCCTACAACAGAACCTCCA
GCATCATCTTCGCACGATGGTGTGTTTTCAAACACTCAGGCCAATGATGACGACGAAGAT
AAGCCCACTGACGAAACACCTCCTACCTACGAGGAGGCTGCTGCGGATGCCACTCCTCCT
TACTGGGCAACCACTATTCTCCACCCTGGCTACGCGGAAGAGGTGTTTATCGACGGACTT
CCCGTGGGCTCGCCCATTTCTTTTTTGTGGAACATGACTGTATCGTCCGTTTTCCAATTC
ATCGGTTTTGTTCTTACGTACCTGCTGCACACGTCGCACTCGGCCAAACAGGGCTCTCGA
GCAGGCCTCGGACTCACAGTGTTCCAGATCGGCATGTACATGCGAAACAGCGGAGGAAAC
CCCACTACAGACTACTCGTCAGTACCTGCACACCAATTTGTGCCCTCAGACCCCAACAAC
TTCGATGTACCCGGTTACGGATCCAACATTCCGGGAAACGCAGTCATTCCGACCATGGAG
CATGTGGACCCCACGGTGCAGGAACAGGAGCGGGCCGCTCATGAAAAGAATGTCTTCTGG
TCAGGCATTATCATGGCGGTGGGAACTCTTGTCATTCTCAAAGCTCTGTGGGACTACTGG
CGTGCTCGACGAATGGAGTTGATTGTTCTTCAAACTCCCCAGCACGTAGTGACGGAAGAA
GATACCCCCGAGACTGCTGTCTAGGAAAGGAGGGAAGCAAATAGACTAACTTGGCCCCCG
TCAGGAAGGGGACCATTATTTATTAGACACTGCATGGCACATACTGTAATAGCATGATGG
AGTACAAGCATCTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26301g_CDS-001

Protein length: 388 aa.
Product: Conserved hypothetical protein

>YALI0F26301g_CDS-001 MTRHSMESNDSNDVLFDAPSSPRDALAAAFGSDSDSDSDDEHHLQSGGRMGRSYNQVDTS
TQDDDDDLNHDDDGGATLEELAQTEDPQYDRSNYADDRLGGSNNNGGHTRIPGGFPEAGN
TGSGSGGNAGSGSEGSNVFSTGFFNRLFNRGQLLPTTEPPASSSHDGVFSNTQANDDDED
KPTDETPPTYEEAAADATPPYWATTILHPGYAEEVFIDGLPVGSPISFLWNMTVSSVFQF
IGFVLTYLLHTSHSAKQGSRAGLGLTVFQIGMYMRNSGGNPTTDYSSVPAHQFVPSDPNN
FDVPGYGSNIPGNAVIPTMEHVDPTVQEQERAAHEKNVFWSGIIMAVGTLVILKALWDYW
RARRMELIVLQTPQHVVTEEDTPETAV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG