YALI0F26279g

Overview

Description similar to uniprot|Q873I9 Neurospora crassa B9B11.100 related to pirin
Locus type CDS
Locus tag YALI0F26279g

Location

Species Yarrowia lipolytica Positions 3372276..3373349
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1074 (nuc.)
Previous locus YALI0F26235r Next locus YALI0F26301g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26279g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26279gYALI0F26279g_mRNA-001YALI0F26279g_CDS-001

Nucleotide sequence

 

>YALI0F26279g
ATGTTAAGAAAACAACAACTCATCAGCAAACTACAACAACTAAAACTAATGTCTACCACT
ACCGATATTACTACACCCATTTCCAAGCCCATTGACAAGATCTTCACTGCTCTAGAGACT
TCCGAGGGTCGAGGAGCGCGTGTTCGGCGTGTCATGCCTACTGGGAATATGGTGAACTTT
ACCCCCTTTCTTATGTTTGATCATTTCAAGGTGCCCTCTTCTGCTGGTTTCCCAGACCAT
CCTCATCGAGGCCAGGAGACTATCACCTATGTGGTTGATGGATCCGTCGACCACGAGGAT
TTCACTGGTAGCAAGGGTACTCTTAATGCCGGAGATTTACAATTTATGACTGCTGGACGA
GGTATAGTGCATGCTGAAATGCCTTCTGCGGGTCCTAATGGAGAGGTCCGAACTGTGGAG
GGTATCCAGCTGTGGGTGGACCTACCCAAGGAGCTCAAGAACTGCAAACCTCGGTACAGA
GATCTGAGAGCCGCTGAGATTCCTATTGCCAAATCGGATAGCGAGGATCTCACTGTCAAG
GTGATTTCTGGCAAGTCTATGGGCGTCGATTCCGTCAAAGATCTTGCGTATACTCCTGTC
TGGTTCCTTGATTTCGAATCTTCCAAGCAGTACAGCGGACGAGAGGTCAACCAGGATATA
CCTGAGGGCTTCAACTCGCTGTTATATGTCATGAAAGGCACAGCTACCGTCAACGGCAAG
AAGATCAAGCAGCATGATGTGGTTATATTCAAGAATGGAGGAGACTCTATCGACTTCATC
CCTGGTCCTTCCTCAAGAGTCATTGTCATTGGAGGAAAGATTCTGGAACAGCCCATTGTC
CAGCATGGTCCCTTCGTTGCAACCACCAGAAAGGGCATTGTCAAGGCCTTTGAGGACTAC
CAGACTCGAACTCATGGTTTTGAGCAGGCCAAGGGTTGGTCTTCCGAAATCGGTAAGCGG
ATGAAGCTGTAGGCCCACGAGTCTACAGTACGAATACCGGTACGTAGTCACCGAAGTCCC
TTACTAACCTTTTTATATACCTACATAGCATAAATATAAATGAACTATCAATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26279g_CDS-001

Protein length: 324 aa.
Product: Pirin, putative

>YALI0F26279g_CDS-001 MLRKQQLISKLQQLKLMSTTTDITTPISKPIDKIFTALETSEGRGARVRRVMPTGNMVNF
TPFLMFDHFKVPSSAGFPDHPHRGQETITYVVDGSVDHEDFTGSKGTLNAGDLQFMTAGR
GIVHAEMPSAGPNGEVRTVEGIQLWVDLPKELKNCKPRYRDLRAAEIPIAKSDSEDLTVK
VISGKSMGVDSVKDLAYTPVWFLDFESSKQYSGREVNQDIPEGFNSLLYVMKGTATVNGK
KIKQHDVVIFKNGGDSIDFIPGPSSRVIVIGGKILEQPIVQHGPFVATTRKGIVKAFEDY
QTRTHGFEQAKGWSSEIGKRMKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG