YALI0F26081g

Overview

Description some similarities with uniprot|O94317 Schizosaccharomyces pombe Uncharacterized serine-rich protein
Locus type CDS
Locus tag YALI0F26081g

Location

Species Yarrowia lipolytica Positions 3351462..3354644
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3183 (nuc.)
Previous locus YALI0F26059g Next locus YALI0F26103g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26081g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26081gYALI0F26081g_mRNA-001YALI0F26081g_CDS-001

Nucleotide sequence

 

>YALI0F26081g
TCCCGCAACACTTACAACCTCTGTCAAAAGGCAATCTGCTGTCTCTTCCTTCCTGGTCCG
AGACATTCGACATCGACATCGAGACCTACAACCAAACCATCAAGCCTATCGAGCCTTGGA
ATCGAAGACAGTCTTAATCGTGCTTCTCCTCCGTGATTTTTGTTCCTCTTGTTCCTTTTA
ATCCATTCCTGTTCTTTTTTTGGCACCATACTACAGCACTACTTGTACTTCACTTTCGTC
ACCTCCATCTTCTTTTTTTGTTAGTGTATTGTCTTCTCCATCCACGGACCACATCCTTTG
GCGCCATTCGACAAATCCAACAACCGGTGAGTACGCAACGCGCATCTGTTCACACAGCCC
GCCCGACAAAGACGACCGTCGCTCCTGCAAAATTGATTACCTAATTCAATCGCCAAGACC
CACACATACATGTTCATGCATAATCATAAAAGCGCGCCCTCGGCCTCACGCGCCATGACC
GCTTGGAAAAGGTCCATTGACAACACTGACTGAGGGGTATTCTTGCACATCTGCCCCCCC
AGCTAGGGCCACTCGGATGATGGGAACCCGGTCCAGCCTTTTTCCGCCGACTCTTTTTTC
CATGCATCAAGATCTTTTGGACGAATCAGACGACTTTTTCCCCGTGTGTCCTACCCAACC
AGTTTAAGCTCGCATCCACACTCTCAGCTGTTCGCTGCCAGCATCCTTCTTCAGCTTATA
TGAGCTGTTGTCATTCACTAAAGTGCGAGAAAGCTGGCGTGATTTCTAATGATTCCCACC
AATCTACCGAGATATGTGATTTGCCTCTTCGGTTTTCCCTTGCGTACACACTGTATGGTG
TTTCCTTGTATTTCGTGGTGTTTGAAGCTAACCCAGACCTGTGGAACCCCCCCACCTCCT
ATTACATCACCACACACCGAACGCAGCCCAGCGCACTGAGCTGCATCGGTCCCCTCCAAA
TACCAACAAGCCTTTTGAATTTGAGCAAATCGCAGCACATTTTTTTCCCTCTTGTCACTT
TTTCGCCACAGACAGGACCCTCAACGACTATTATCGACACCAACAACCCCCATACCTTTG
AAATCGTGAGTATCCACGCTGAAGAGCCTGAGTCCGGAGTTGGAAGTGCCCCCAAGCCCG
CAACAGCGTGTAATTGGATGTTTTTGGCGAATAGCTGGAGTGTCGCGCTTAGTCATCTTG
ATAGCCAGTCCAAGAACATCTCGGAACCTCCCATTAAAGTTTCTGTCCGACAGATCAGAT
TTTAGATGCAATATCGGTTGTCCAGGAAACAGACAGATGGGAGGTTAAAGAGAGAGACAG
TGACAGAGAGACGGGACGGAGGTTAGTTAACGAGCAAAAAAGAAAAGACAAGACCGAGCG
CCAGAATTCCCCACACCGCTGACGTGTCAATGTATGCCGGCAGGTGACACCGGCAGGTGA
GTGGCCCAAGAGAGTCCGTGTGTGAGCAAATTTTCGTGTGTCAAAATAGGAGCATCAGCC
ACCACCTTGTGACTGTCTCACTTATTTTTTGACCAGGTCTTCTTCGCCCACCAACAACTC
AGCCTTGTGCGCACTTGAGATACTCCTCGCCTCATTCGGCTTGGCGTGGGAGGAGTGTCT
CGAGTCTACTCTACACTGAACTTACGCTGGTAGTCAATCTTGTCGCCTTTTGGTTTTTTC
GTTTCTCCCACTTTTCTATTTTTCATTTTCCCGATCAGTGAGCCTATCTTGGTTTGACTT
TCCACCTTATGCCAGTTCTTTTGTCTCCTCTAGCTCGTATCGCGCGCATGGAAGATAGTC
CTGGACATGTCTGACTCCAAGCTCCTGGCTTCTCTTCTTTTTAAACCCAGCCAGCCGCCG
CCCACCAAGGCCTCTCCATCCACAATTACTTTGCATGCATCATCCCACGACACCCTCCAA
CTAACACAGATGTACTCATATCCCACCATTGAAGAGCCGCAGCTCGCGGATCAGGACTGG
TACCCTACCACACAGGACTTTTTCTCCTACCCCGTTCCCACCGTCGCGGACCACGAGCCC
TCCCCCCAGGCACCGCAGCCGCAACCACAGCTCTTCCGACCCCAGTACATGGGTCGTAGT
AGCTCATTCAGCCCCTCGCTGGACCAATTGAAGCGAGGTGACGACTTCAAAACTCTCATG
TTGCCGTCGTCCTCCAACATCCATGCCAATGCTCCCCACACCCAATTCACCGCCACCCGC
ATGAAGCGATCTTATACACAGCCCGAGAAGGACAATGATACTCTCAGACGGTCCCAGTCC
ATGATGGCCCTGTCTGTTTCCACCGACGGACGAGCCCGTCTCCAGCCCAGAGAATCGCGG
GCTGCGCGAGATCACTCGCCCCACAAGTTCCGAATCGAAGAAGACATTGATTCGCAGTCG
TCTTACTCTGATAATGTATTTTCGGACCGGTCGTCTATGTCGTCGGCTTCCTCAGCATCT
CCTCAGCTGGCCACAGACTTCCCGTCCTGTGTCCCAGTGCCAGTTGGAGTGTCTCGATCC
AAGTCCTGCGTGTCGCTTTCGCAGTTTGGAGGCTCGGCATACCCTTCTCTTCCTCCTCCT
GCAGTTTCTGCTGCCTCATCCACTTTTCACTCTCCTTGCTCCTCCCCTTCCCCCAGCGTT
TCTTCTTCTTCCGACGAAGACGACGAGGTGGCCGCCCCCAAAAACGACGCATGCGTGGCG
CTGGCTCGTCTGGTGGCCCGAAAACGGTCCAAGTCTCTCAAGAGTACCAACGCTGCTCCC
CAGAGACCTCCACATGTCCGATCTCGGTCTCTCGTCGGAGCCTCGGACACATACCAAACT
CGAGCTGCTATGTCTTCGACCTCTACCATGGAGTCGTTCCAGTCGCGAGCAAGACGAGCC
TGTGCACCGGTAGTGCCGCCCGCTAGCATGCTGACTCCCCCTGCCTCCGCCACCTCGGAC
AAGGGCTTTGACTTCGGCATGACCCGAACTTCTATGAGATCCATTTCCCCCAAACGAGGC
CGAACCTCCATGGCCGTCGCATTTAACTACACAGACGGTTCTCCTCATTCACACTTTCAT
CGACGACAAATGTCGCTCAGTGACCTTAGCCAGCTGTCGCTCCAGCCCGTACAGTCTGAG
TGGTCCAACTAACTTGCATAGATGTATATATACATTGACAATCCAAAACAAAGAATAAAC
GAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26081g_CDS-001

Protein length: 401 aa.
Product: Conserved hypothetical protein

>YALI0F26081g_CDS-001 MYSYPTIEEPQLADQDWYPTTQDFFSYPVPTVADHEPSPQAPQPQPQLFRPQYMGRSSSF
SPSLDQLKRGDDFKTLMLPSSSNIHANAPHTQFTATRMKRSYTQPEKDNDTLRRSQSMMA
LSVSTDGRARLQPRESRAARDHSPHKFRIEEDIDSQSSYSDNVFSDRSSMSSASSASPQL
ATDFPSCVPVPVGVSRSKSCVSLSQFGGSAYPSLPPPAVSAASSTFHSPCSSPSPSVSSS
SDEDDEVAAPKNDACVALARLVARKRSKSLKSTNAAPQRPPHVRSRSLVGASDTYQTRAA
MSSTSTMESFQSRARRACAPVVPPASMLTPPASATSDKGFDFGMTRTSMRSISPKRGRTS
MAVAFNYTDGSPHSHFHRRQMSLSDLSQLSLQPVQSEWSN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG