YALI0F26059g

Overview

Description weakly similar to uniprot|Q12524 Saccharomyces cerevisiae YLR151c PCD1 peroxisomal nudix hydrolase
Locus type CDS
Locus tag YALI0F26059g

Location

Species Yarrowia lipolytica Positions 3345388..3346702
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1315 (nuc.)
Previous locus YALI0F26037g Next locus YALI0F26081g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26059g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26059gYALI0F26059g_mRNA-001YALI0F26059g_CDS-001

Nucleotide sequence

 

>YALI0F26059g
ATGTCTACCGACGAGATCCTGAGAAATTTCAAGCGGTTTGAAAAGCAGCGCCTTAAGGAC
GCGACGAAGGCTGGTCCACGTGATTTTCCCGGCCAGAAACGCCCCAAAATCGGCACTACA
CCATGGTACACCATTCCCCTATCACGTCGAAGCGCTGTTCTGATGCTGCTGTTTGAAGTG
GCTAATCCCGACAAGCCAGCTGGAAAGGAGCTACATATTCTGTTCACAGTCAGATCCGCG
CACCTCCGGTCGTTTCCCGGCCAAGTGGCGCTTCCAGGAGGCAAACTAGACCTGGAGCTG
GATGGATCCAACGTCAGCCATATTGAAGCAGACCTGTGGGAGAACGTTGATCCCGCACTG
TCAAGTGACACTGAAAAGAGATTGTCTGAGTCGGCATCGTTTTCTGCCTGGAGTATTGCT
CTGAGAGAAGCCTATGAGGAGGTGGGTCTGTTTGGAGAGTTCATCAATGAAGACACGAAG
AGCATTTTGATGAACCCGGTGGATGGAGGAAGGGATGCCACCGGGACGGAAAAGCCACCT
TTTTTGAACGAAAACCCTCTCTTGTCCGTCGAAAAACTGTGCGAGTTGCCACCCTTTGTC
TCCAGAAACGGACTGGGTGTTGTCCCATGTATTGCATTTGCACGGTCCAAGCAACGCGGA
CAATTTCTGAAATACTCGGAGATTTGTCCCAAGCTTAATTTCGATGAGGTTCAATCTGTC
TTCTCCATTCCGTTGGATTACTTCTTATCTAAACACACCTCGGGTGGCGTTGAGTTATAC
AACTCCTACCCCCGAGCAGCGTGGGGAAACACCGGGGTTGATTGGATTATGCACTCATTC
AACCACAATGCACTCCCATATCCCAATATTCGGAATGGCGACAGTAAGGGCCGAGTAACC
ATTGATGATCTTCTGGCTGAAGCCTCGGCTCCGCAAGTTCAGCCTGGAGAACTGACGCAG
GTGGGCCAGAAGATACGGTCACGTGAGAGTATTTTCAGCGAGAGTGGCCCCGAGCCCGAC
CCAGCTTCGTTCCACAAAAACGTCGTGGCAAGCGTAGACTTGCTGCCTCCTATTTGGGGT
CTGACGGGTCACATTTGCATAGACTGTGCTCGGGTGGGTCTGAATAGAGATCCCACCGAG
TTTGATTTTGTCGCTGACATTGGCCAGGACTCGCTGGTGGGTCAGTTGATAAAGGAGGGA
ATGTTTAATCCCCGCCCTAAGAAGCCCCAGTCAAGGGTTTAGAACGAAGACACCGACGTC
ACGGACATTAATTACTTAGAGGGATATAACGGAATCCATTAAACATGGTCTAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26059g_CDS-001

Protein length: 414 aa.
Product: Conserved hypothetical protein

>YALI0F26059g_CDS-001 MSTDEILRNFKRFEKQRLKDATKAGPRDFPGQKRPKIGTTPWYTIPLSRRSAVLMLLFEV
ANPDKPAGKELHILFTVRSAHLRSFPGQVALPGGKLDLELDGSNVSHIEADLWENVDPAL
SSDTEKRLSESASFSAWSIALREAYEEVGLFGEFINEDTKSILMNPVDGGRDATGTEKPP
FLNENPLLSVEKLCELPPFVSRNGLGVVPCIAFARSKQRGQFLKYSEICPKLNFDEVQSV
FSIPLDYFLSKHTSGGVELYNSYPRAAWGNTGVDWIMHSFNHNALPYPNIRNGDSKGRVT
IDDLLAEASAPQVQPGELTQVGQKIRSRESIFSESGPEPDPASFHKNVVASVDLLPPIWG
LTGHICIDCARVGLNRDPTEFDFVADIGQDSLVGQLIKEGMFNPRPKKPQSRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG