YALI0F25817g

Overview

Description weakly similar to uniprot|P53966 Saccharomyces cerevisiae YNL029C (ohnolog of YIL085C) KTR5 putative mannosyltransferase
Locus type CDS
Locus tag YALI0F25817g

Location

Species Yarrowia lipolytica Positions 3325487..3327179
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1693 (nuc.)
Previous locus YALI0F25795g Next locus YALI0F25839g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25817g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25817gYALI0F25817g_mRNA-001YALI0F25817g_CDS-001

Nucleotide sequence

 

>YALI0F25817g
ATGCTACGACGCAGATCTTCAGCATCATACCCACAACAGTCGCTGCCCAAAACACAGGGG
ACCTGGCAGCCGTCCACAATGACGCAGGGAGTGCGGACCAAGGCCCGGTTCTATCTCAGT
CGCATGCCGCTCAAAATCCTGGCTGTTCTCGCAGCGCTGCTCATCACAGCCGGCTTTGTG
ACATTCAACTTGCGCCACCCGGCCGAGCAACAACCCGGCGGAAACAAGCAGTACATCAAA
GAGATTGTGTTTGAGAACCCAGCACTACATGGACCCTTTGTGGCTGGCTGCAGACCGATC
GTAGCTAATCCTGAAGACAAGGTCAACGCGGCGTTTGTCGTACTGGCCCGAAACCAGGAC
CAGGAGGGCCTACTGTCGTCCATCGCTTCGCTAGAACGGCATTTCAACCAGTGGTACAAC
TACCCTTACATTTTCCTCAACGACGAGCCCTTCAACGCTACCTTTAAGGCCGCAATCTCC
AAGTCCACCGCTGCTAAGACGGAATTTGGAGTTATCCCCGACTCTCTGTGGGACTTCGAC
GACAGCGTCGATCGAAAAGAGCTCAAGAAAGCGTTGCAGAACCAGGCGGACCAAAATGTC
ATGTATGGCGACTCGGAATCGTACCACAAAATGTGCCGATTCTACTCGGGCAAGTTCTAC
GACCACCCGCTACTCAAGGACCTTGACTGGTACTGGCGGCTGGAGCCCGACGTGCAGTTC
TTCTGCGACCTGACCTACGACCCCTTCCGATACATGCAGGACAACAACAAGGTGTACGGC
TACAACATTGCCATCAAGGAACTCAAGGAGACGGTGCCTAACTTGTGGCGATACACCAAG
TCATTCAAGCAGAAAAACAAGATGCAGTCCAAGGGTATGTGGGAAATGTTTCTGCAGACA
GCGGAGGAGCGAGAACAACGAGGAGGCCACCCTCTCAAGGACGCTCGAATGTCCGACAAG
AACGACAAGGTCAAGGGTAAGGCTGAAACTAACAATCCCACCTCCAAGCGGTTTGCTGAT
CCTGATTACGAGGATATGGGAGAAGAGGCCTACAACATGTGCCACTTCTGGTCCAACTTT
GAGATTGGAAAGCTCTCCTTCTTCAGATCCAAAGAGTACAGAGACTACTTTGACTACCTC
GAGGAGAAGAAGGGTTTCTGGTCCGAACGATGGGGAGATGCACCCGTACATTCCCTAGCC
GTGGGTCTGTTTCTGGCCCCCTCCGAGGTGCATTATTTCCGAGACATCGGATACCAGCAT
TCGGACATTTTCCACTGTCCTTACAACGCCAAGGGCGCCCAGTTGCCTCCTCCCGAGCGG
TACTGGGAGGGCGTTTCCAAGCGAACCGGTCTCAAACTGACTGACGAGCAGATCAAGGAG
GACGAGAAGTGGCTGGTTCCCGACCCTGCGGAGGAAGGCGGCGTGGGATGCAGATGCATT
TGTCCTCTGGATAAGGCAGCGTTCATCGAGCCGCGAGACGGAAGTTGCATTGCTCACTGG
GTTGAGACCAGAGACAAGGGGTTGTGAAGGATGTAAGATAAGTGTGCGAATGGGACATGG
CATAGAACGAGGAGGAGAGAGGGGTTGGAGAAGGTAAAAGAACATAGCAAACGGACATAA
TTAATACTACCCTCTTTGTGAGCTTAATGTGGGTTATCACATAAAATCCTCACCAAGTCT
AGTGTTCTATGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25817g_CDS-001

Protein length: 509 aa.
Product: Conserved hypothetical protein

>YALI0F25817g_CDS-001 MLRRRSSASYPQQSLPKTQGTWQPSTMTQGVRTKARFYLSRMPLKILAVLAALLITAGFV
TFNLRHPAEQQPGGNKQYIKEIVFENPALHGPFVAGCRPIVANPEDKVNAAFVVLARNQD
QEGLLSSIASLERHFNQWYNYPYIFLNDEPFNATFKAAISKSTAAKTEFGVIPDSLWDFD
DSVDRKELKKALQNQADQNVMYGDSESYHKMCRFYSGKFYDHPLLKDLDWYWRLEPDVQF
FCDLTYDPFRYMQDNNKVYGYNIAIKELKETVPNLWRYTKSFKQKNKMQSKGMWEMFLQT
AEEREQRGGHPLKDARMSDKNDKVKGKAETNNPTSKRFADPDYEDMGEEAYNMCHFWSNF
EIGKLSFFRSKEYRDYFDYLEEKKGFWSERWGDAPVHSLAVGLFLAPSEVHYFRDIGYQH
SDIFHCPYNAKGAQLPPPERYWEGVSKRTGLKLTDEQIKEDEKWLVPDPAEEGGVGCRCI
CPLDKAAFIEPRDGSCIAHWVETRDKGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG