YALI0F25487g

Overview

Description similar to uniprot|E3KLB1 Puccinia graminis f. sp. tritici PGTG_11255 Putative uncharacterized protein
Locus type CDS
Locus tag YALI0F25487g

Location

Species Yarrowia lipolytica Positions 3274496..3275243
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 748 (nuc.)
Previous locus YALI0F25465g Next locus YALI0F25509g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25487g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25487gYALI0F25487g_mRNA-001YALI0F25487g_CDS-001

Nucleotide sequence

 

>YALI0F25487g
ATGATGTTACGATCTCTGAATCTTTCTATTAAAGGTGTCTCTACTCTGTCGGCCCATACA
CCTACCACCAAACGACTATTTACGTCTTCCACATCTAACATGGCCCCCCGAATCACACGA
CCCAAGCTCAAGGAGTACCCCTTCGTGGTTACTCAGTCGACTCGATGGTCTGACAACGAC
CAATATGGCCATCTCAACAACGCTGTCTACTACCACTTCTACGATGCACTTGTTAACGGA
TACTACTGGGATCAATGCAAACATAACGTGATGGGCGATCTACGGGCTCTCGTGGTCGCC
TCAGGCTCAGAATACTTCGAGATCATCGACGGATTCCCCAAACCTCTGGTGCTCGGTCTG
GCAGTACGGAAACTTGGACGATCGTCTGTGGAGTTTGAGATCGGAGTCTTTCAACAGAGC
AAAACGGCCGAGCAAGAGGAGTCAGCAGAAAGCATTGTCTACGAGGCCTGGGCCAACTCC
GGAGAAGATCCCGTACCTGCCACCACAGAAGAGGCTCTGTTCAGAGAGCTGAGAAACCAA
AAGGTCAAGGCTCTGGGAAAATTTGTGCATGTCTTCGTCGACTCGACCACCAACAAGGCG
GTTCCAATTCCCGCGGATCTCAGAAAGGGCCTGGAGGAAATTTATGTTGGTCCTTCTCTT
CCCAAGATGTAAACTACAATGGGACAACAACAGCAACAGTAAACTGTTTAATGATAGTTA
TGAATATAAGGATAAGCATGAATTAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25487g_CDS-001

Protein length: 224 aa.
Product: Conserved hypothetical protein

>YALI0F25487g_CDS-001 MMLRSLNLSIKGVSTLSAHTPTTKRLFTSSTSNMAPRITRPKLKEYPFVVTQSTRWSDND
QYGHLNNAVYYHFYDALVNGYYWDQCKHNVMGDLRALVVASGSEYFEIIDGFPKPLVLGL
AVRKLGRSSVEFEIGVFQQSKTAEQEESAESIVYEAWANSGEDPVPATTEEALFRELRNQ
KVKALGKFVHVFVDSTTNKAVPIPADLRKGLEEIYVGPSLPKM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG