YALI0F25465g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F25465g

Location

Species Yarrowia lipolytica Positions 3272427..3273975
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1549 (nuc.)
Previous locus YALI0F25443g Next locus YALI0F25487g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25465g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25465gYALI0F25465g_mRNA-001YALI0F25465g_CDS-001

Nucleotide sequence

 

>YALI0F25465g
ATGAACAGAGACGAGGCCATACAGGCCACACTAGACGCTCTGAACCAACCCATGGTCCGG
GGCGATTCGTCCGACTACCTCAACAGCAGACCCAGCTTCCACTCCAGACGATCCTCTATC
ATGGCCCAACTGTCCACACCCAACCACCACGCCAGAACTCCCTCCGTGTCTATGTCCGAC
TCGGATCTCAGCTGTATGGACGAGAACAAGCGCCGGAGCCGCATATCCATTGATTTTTCG
GGTCTGTACTCGCCAGCTTCATCGACTGGGGACTGGTGTGAGAAGGAACTGCTTAGTCCT
GATCCCGAAATCGAGTCCCTCGACAAGAAACGGTCCTCCAAGGGCTCCGAGTTCTTCAAA
CGATGGTCGCTGGGACCTGCCACAAGCGTCACCCAAGTGTCACGACAAACCCAGGCACTT
TTATCGCCCCAGGAGTTCCACACGGCCGAGTTTGAACCTCAATCATGCATGTGGCAACGA
ACACTCCAGGAGATGGCCCGAACAGATAACACCCGTCTGGCACTGTTGGCTCGAAACTCG
AACGCAAACTCGTACCCACTGCAGTCTATGCACAACAGGAAACGCCACTCTTGCGACTTT
ACCAGCTCAACTACAGCTTCCAATGGTCTGGGTCTCGGCCTGGGCCCTCTCCGAGCTAGC
ACTCCTGTAAAGGGCCCTAACAACCCATTTGTGCCTTTTTCCTTCGAGACGGGTAGTGAA
GAGTCCACAGAGTCGCCCGTCCACACAAAGCTCAAGCATCGGACCTCCATGTCTCGAACT
CGGCCGCTGTCCATGACACGATCCACGTCTCAAAAATTCAACTCTGGTAACTTTTCGCTC
AGACAACGGGCAGGAACACCCACGCCGACCAGAGACGGCGACAGTACGCAAGTGGATAGC
TTTGTTTTTGGTGCTGGAGACATGTCTTCGGACTCAAACTCCACTGCCGTGGACCCTCTG
GACACCCAACACACCCAGGAGGTGCTCTCCAAACCGCCCCTGGATCCCACAATCCCCATC
ACGGACTGGAGCCAAAAGGCCCAGCTCGTTAAACTTATTTGTGCGTCTATCCAAGATGCT
CCCACTATGATGGCGTACATCAACTTGCTATGGACCGCCCTCTCCAACCCCGAGAACCTG
AATCTCAACAAGATTGATATTGTTCCAAGCTCGCTGGAGGACGTTGCTGCGCTGCAGGAC
AACCTGGTTCTGTTTGTGTCTGAAATCGACGTGAAGGCCATGGTCTCTGCCGGATGGATC
CGGTTCTACAAGGTCATGTATGCGTCTGCTGTGGTGTCTGCTACAATTGGACTGCTGGCA
TTCCAGACCTTGCTGCTACTGCTCTACCTGTGCGTGGCTTCGGTGATCATCCTGGGTAGC
AACATTTTGCACAAATTTGAAAAGAAGACCCAGCCTCAGGAGGCTGCAAAGGTGCTCGCT
AAGGAGTGTAAGGAGGAGTAATTAATTATAGGGTGCACCTAAATAGAATGCATATGGCTC
ACACGCCAAAATATATTAACACGTAATACAACTATCGTACTGTTCTCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25465g_CDS-001

Protein length: 487 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F25465g_CDS-001 MNRDEAIQATLDALNQPMVRGDSSDYLNSRPSFHSRRSSIMAQLSTPNHHARTPSVSMSD
SDLSCMDENKRRSRISIDFSGLYSPASSTGDWCEKELLSPDPEIESLDKKRSSKGSEFFK
RWSLGPATSVTQVSRQTQALLSPQEFHTAEFEPQSCMWQRTLQEMARTDNTRLALLARNS
NANSYPLQSMHNRKRHSCDFTSSTTASNGLGLGLGPLRASTPVKGPNNPFVPFSFETGSE
ESTESPVHTKLKHRTSMSRTRPLSMTRSTSQKFNSGNFSLRQRAGTPTPTRDGDSTQVDS
FVFGAGDMSSDSNSTAVDPLDTQHTQEVLSKPPLDPTIPITDWSQKAQLVKLICASIQDA
PTMMAYINLLWTALSNPENLNLNKIDIVPSSLEDVAALQDNLVLFVSEIDVKAMVSAGWI
RFYKVMYASAVVSATIGLLAFQTLLLLLYLCVASVIILGSNILHKFEKKTQPQEAAKVLA
KECKEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG