YALI0F25245g

Overview

Description weakly similar to uniprot|Q9HEE0 Neurospora crassa NCU03807.1 hypothetical protein
Locus type CDS
Locus tag YALI0F25245g

Location

Species Yarrowia lipolytica Positions 3256284..3257073
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 790 (nuc.)
Previous locus YALI0F25223g Next locus YALI0F25267g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25245g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25245gYALI0F25245g_mRNA-001YALI0F25245g_CDS-001

Nucleotide sequence

 

>YALI0F25245g
ATGATCCCTTCAAAACACACGACTATCAAAGATCTAGACATTGTCACCTATGCATTCAAC
GACAAGATCTTCGTCAATATCCACAGCAAAGGAGCATACACTAGATCATACTATGTTCCC
CTAAGACTATCTCCAGGCAATCAGTTCTTTGCACATACCGAATATGACGACGAAGGCGAA
GACATCAGCAATCTGCCACTCACTCATCTCACTCCCATGTCGCTAATTGGAGGCTCCAAT
GCTGACACATTGGGTCAGATCATAGCTGTCCAGGTGGCGTCCCAGGTAGTCAAGGACTCG
CCCACAGAGGTGCGAACTGTGTTTGTGTCCATCGGCCGAGTCAGTCAGGACGACTACGAC
GACGTTCTTGAGGGAGTCAAGCTTTGCCGTGTTTGGTAATTGATTATGGGTGTTGGATTG
TGTGGAGGTGTGGGAGTGGTTGAAAAAGAGCCTTGTGACACCCGTCGATTCGTGTGCCTG
CAGTGGGACTATCACCAGACTCTTTACGACGAGTCTGAGCTGTTATTTCTGCGGTTGACT
ATGGTACAACTACAAGTACTGTCCTGTACTTGATAAAATGACAGTCGACCCGGTACACAC
AGTGTAAGCACGTTCATCAGTTGTGATCGACAGCACCTACTGCACCTACAGCACCCCCCT
AGGAACACAGGTGCTACCGCGCCCATAGCCCACACTTGTGATCATTGCACCAGAGGACAA
CTGAACTAGAATAAAATTTAATATCATTGCATGACTCTCGATCGGTCAGTCGAAGCGTGT
TCTCTGATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25245g_CDS-001

Protein length: 133 aa.
Product: Conserved hypothetical protein

>YALI0F25245g_CDS-001 MIPSKHTTIKDLDIVTYAFNDKIFVNIHSKGAYTRSYYVPLRLSPGNQFFAHTEYDDEGE
DISNLPLTHLTPMSLIGGSNADTLGQIIAVQVASQVVKDSPTEVRTVFVSIGRVSQDDYD
DVLEGVKLCRVW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG