YALI0F24739g

Overview

Description highly similar to uniprot|P0CX46 Saccharomyces cerevisiae YIL018W (ohnolog of YFR031C-A) RPL5A 60S large subunit ribosomal protein L8.e
Locus type CDS
Locus tag YALI0F24739g

Location

Species Yarrowia lipolytica Positions 3209852..3210792
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 941 (nuc.)
Previous locus YALI0F24717g Next locus YALI0F24761g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24739g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24739gYALI0F24739g_mRNA-001YALI0F24739g_CDS-001

Nucleotide sequence

 

>YALI0F24739g
ATGGGTCGTGTCATTCGAAACCAAAGAAAGGGTGCTGGTTCTATCTTCACCGCCCACACC
CGGCTCCGAAAGGGCGCTGCCAAGCTCCGAGATCTCGACTACGCCGAGCGACACGGATAC
ATCCGAGGTGTTGTCAAGGAGATCATCCATGACCCCGGTCGTGGTGCTCCCCTCGCCAAG
GTCGTCTTCCGAGACCCCTACAAGTACAAGCAGCGAGTTGAGACCTTCATTGCTAACGAG
GGTGTCTACACTGGCCAGTTCATCTACGCCGGTAAGAAGGCTACTCTGAACGTCGGAAAC
GTTCTGCCCCTGGGCTCTGTCCCCGAGGGTACCATCCTCTCCAACGTCGAGGAGCACGCC
GGTGACCGAGGTGCCATTGGCCGAACTTCCGGTAACTACGTCATTGTCATCGGCCACAAC
CCCGATGAGGGCAAGACCCGAATCAAGCTTCCTTCCGGATCTAAGAAGATTGTCCCCTCT
ACCGCTCGAGGTGTCATCGGTGTTGTTGCCGGTGGTGGACGAATCGACAAGCCCCTGCTC
AAGGCCGGCCGAGCCTTCCACAAGTACAAGGTCAAGCGAAACTCTTGGCCCAAGACTCGA
GGTGTGGCTATGAACCCCGTCGACCATCCCCATGGTGGTGGTAACCACCAGCATATTGGT
AAGGCCTCTACCATCTCCCGAGAGGCTGTTTCTGGTCAGAAGGCTGGTCTCATTGCTGCC
CGACGAACCGGTCTGCTCCGAGGTACCCAGAAGATCAAGGAGTAAATTTAAAAAATGTAT
TATTGCAACGAGACATTCAAACGACGACTGTAATCATTCTAAGAGAGACAGCGATACCTC
AAGTAATCAACAAGTTATTAAAGAGATTCTGTATAGGCATGACAGTGATGGTGGGTCAAA
ATTTTCCAACCCATTCATGCGGTAAAAAATTCTACTTCTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24739g_CDS-001

Protein length: 255 aa.
Product: Ribosomal 60S subunit protein L8, putative

>YALI0F24739g_CDS-001 MGRVIRNQRKGAGSIFTAHTRLRKGAAKLRDLDYAERHGYIRGVVKEIIHDPGRGAPLAK
VVFRDPYKYKQRVETFIANEGVYTGQFIYAGKKATLNVGNVLPLGSVPEGTILSNVEEHA
GDRGAIGRTSGNYVIVIGHNPDEGKTRIKLPSGSKKIVPSTARGVIGVVAGGGRIDKPLL
KAGRAFHKYKVKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISREAVSGQKAGLIAA
RRTGLLRGTQKIKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG