YALI0F24541g

Overview

Description similar to uniprot|G1X611 Arthrobotrys oligospora AOL_s00054g305 hypothetical protein
Locus type CDS
Locus tag YALI0F24541g

Location

Species Yarrowia lipolytica Positions 3189195..3191104
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1910 (nuc.)
Previous locus YALI0F24519g Next locus YALI0F24552g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24541g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24541gYALI0F24541g_mRNA-001YALI0F24541g_CDS-001

Nucleotide sequence

 

>YALI0F24541g
ATGATTGTGAGTTGAACTGAGAGAGACGCAAATGAAGCGGCCGCTTCTTTTTTCCCAATG
CTAACACAGCTATTTCCAATTCTGGCCTTCTGCGCCACCGCCGTGTGTTCCGTTCTGTGG
ATCTCACAGTACTCCTCCATCAAGAGCACTCCGCTGTTCATTCTCCTGCCTTTGGTGCTG
GCAGTCTACATTCCCTTCTCCATTGTCGTTCTGGTCCCCATTGACCTTCTATCGGCCAGC
TCCAATGGCGAGGGCCACCCGCTCTTCTATCTCAATGAAAACGTGCGTCTCATTCTCTGG
CGAGTCTCCTACTGGTTGGCATTTGTGCTGACATGGGCAGTTTTGCCCCTGCTGCAGAGC
TACGTCGAAAGTGGCCACCACGACCCCAGAAAGAAGGCCCGGGAAGCAATCATGTACAAC
CTCAAGTACCAGGGCATTTTGCTGGGCGTGGGTCTCATTGGACTCATCTACACCATCATC
TCCACCGGCCTGTCAATCACCAGTATCAAGCAGGTGGCAATTGCCCTGTCATACTCCTAC
ACGCTGATTTTCGCCATCTGGTTCATGGGTCACGGCCTTGTCAATGTGCCCCGACGACTC
TGGATCCTGGCGGCCCCCACTGAACGTGTCAGACAGCACTACAGAAAGGCCGTCTCGGTA
CACGACAGATACGCCGAGGCCCAGCAAAAGTACATTGAGGTGTCCAACGAGGTGCTTGCA
CTCAGAGTCCACCGAGAACACACCCAGTACACTAACTGGGTCGACGAGCTGTGTGACTCC
ATCGAAGACACCTCCAATGTGGTCCAGCTGCCTCCCAGAGGACGTCCCGCCACCGTGGAG
CGATCCCGGATCTCCGAAGAGTATCTGTCAAACCTCCAGAGATCGTTACAGAAGGCTGAA
TTCCGACTTATTCGATATACCATGGACTGGAAGAACTTGGTGGACGAAGCTGCGCGAGAT
GAAGACATTGTCAACTCGCACGGAGACCTCAAGTTCCGAAGATCGTCTACTCGACTGCCG
CCAAATGTCGCTCACATTTACTACTCTCTGGTTGAGCCCTGGGTAATGCGTCTTGGAGCT
GTTTTTTGGGGTCTGTTATCTCTGACTCTGGTGTGGAGTGAATTGCTGTATGGAACCAAG
TACTCGCTTGTCAACATTATCATTTCGTCCACGCAGGGCTTTGGTCAGCAGGTCGTGTCT
TCTTTTATTCTCGGATACATGTGCTACACTGCAGTGTCGTCCCTCTTCCGAGTGCGTGTC
TTCAACGTCTACGGTTTGGTTCGACAGCACTCTGACGCGTCGTCCATGCTCTTCTACGCC
ATGTACGCCTGTCGTTTGACCGTCCCCATCGCTTACAACTACCTCATGTTGATTCCCTCT
CGAGAGTCCGTTTTCCAAGCGTTCCTGGGCAAGTACATTAACCTGACTCCTCTTGGCACC
TTCTTTTCCGACGGAATCCCCCGATTCATCCTCGTGCCTATTGGCCTGACTTTGTTCAAC
GTCTACGACAAGATCAAGGGCTGGTTCGGCTTCGGTTTGGACTTCACCGATGAGGAGGAG
GACTCTGACGACGCCTCTCTCTACATTGAAGGCCGAGATCTCATTTTCCGAGAGATTGAA
ATGAATGGACGAAGCTCTGGGGGCGTGCGAGTGCCCAACCCTCGATTCGAGGTGCCTCCC
GCGTCCCCCGATACCCAGATCACAAAAATGTCCAATAACATAAAGGGTTTCTTTGGCAAC
TTCTCCGAACGATGGAACAGTGGTCAGTGGACCCAGGAGACCCAGGCTCTCGAGGAGGGG
CTGTTGGATGATCGAATTTAACCAACCCAGGACCAACGGACCCACAAGTCCAGGATCCTT
TAATGAGTAATGACAGTGATAGAATGAATAGAATATGGATATATGACAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24541g_CDS-001

Protein length: 586 aa.
Product: Conserved hypothetical protein

>YALI0F24541g_CDS-001 MILFPILAFCATAVCSVLWISQYSSIKSTPLFILLPLVLAVYIPFSIVVLVPIDLLSASS
NGEGHPLFYLNENVRLILWRVSYWLAFVLTWAVLPLLQSYVESGHHDPRKKAREAIMYNL
KYQGILLGVGLIGLIYTIISTGLSITSIKQVAIALSYSYTLIFAIWFMGHGLVNVPRRLW
ILAAPTERVRQHYRKAVSVHDRYAEAQQKYIEVSNEVLALRVHREHTQYTNWVDELCDSI
EDTSNVVQLPPRGRPATVERSRISEEYLSNLQRSLQKAEFRLIRYTMDWKNLVDEAARDE
DIVNSHGDLKFRRSSTRLPPNVAHIYYSLVEPWVMRLGAVFWGLLSLTLVWSELLYGTKY
SLVNIIISSTQGFGQQVVSSFILGYMCYTAVSSLFRVRVFNVYGLVRQHSDASSMLFYAM
YACRLTVPIAYNYLMLIPSRESVFQAFLGKYINLTPLGTFFSDGIPRFILVPIGLTLFNV
YDKIKGWFGFGLDFTDEEEDSDDASLYIEGRDLIFREIEMNGRSSGGVRVPNPRFEVPPA
SPDTQITKMSNNIKGFFGNFSERWNSGQWTQETQALEEGLLDDRI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG