YALI0F24519g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F24519g

Location

Species Yarrowia lipolytica Positions 3188306..3189169
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 864 (nuc.)
Previous locus YALI0F24497g Next locus YALI0F24541g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24519g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24519gYALI0F24519g_mRNA-001YALI0F24519g_CDS-001

Nucleotide sequence

 

>YALI0F24519g
ATGAACAAACTAAAGCTGGTGAAGACGTCCAAGGAGCTGGCGCTTCAACAAAAGCGACAA
GGCGGTGATGCCAGCTCAGATGAGCCGCCAAAGCAGCAGCTTCACATCACCGAACCTCCG
TCGATTGTGGCGTCTGAAACAGGCAACCTCAAGTTGGTGGTCCCACAGACAATCTCAGAA
CACAACCAGCTGATTGTCAATGAGCCTGTGGCGCGCCAGAAACCGAGGAATCCTGTCAAG
ATACTGGACGAAGATGATTATGCGCAAAAACTGAAGCAAATCATCGAATCTGGAGGAGAT
ACAACGGCCTTTCAACAAAAACACACCACAGAAGATAACGCCTCGTTTCAGCAGCTGATC
CAGGTGGATAACGCAAGAAGAGACGTGAAAACGGCCGACAGATTCTCAACCACAAAGCTC
GACAATGACTGGGACAAGCCCAACCCCAAAAGTGCCCTATTCTTCAGACCAAAAGATATC
CCCCAGGAACCGTCTCTTAGAGGAGAGATCGCCGTGGAAAATACCATTGTGGTGAAGGAG
AATGTGGAGGTGGAGGACCCCAGCAAGAAGTCAGAACAGATTGCTGACGATATCATTGCT
GCGGTGAAGGGCCCGCATGTTGATGGGTATCCGTTCGTGACCAAAAACACATATAAGATC
GCTCCAGAGTCCAAGGAGTCCATGCTTTTGAGAAAACTCACTGCAAAGAAGACTGCCAAG
GTCACCGGAGACGTGACTCCACGAGGTGACCTCTCTCCAGCAGGTAGAAACCTCCTGAAC
AAGATTTCAAAGAGGAGAAAGTGATTTGTCCCTGACTCTCTACTATTTATTCATATTATT
TATACATTATTCATTAAATCACAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24519g_CDS-001

Protein length: 268 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F24519g_CDS-001 MNKLKLVKTSKELALQQKRQGGDASSDEPPKQQLHITEPPSIVASETGNLKLVVPQTISE
HNQLIVNEPVARQKPRNPVKILDEDDYAQKLKQIIESGGDTTAFQQKHTTEDNASFQQLI
QVDNARRDVKTADRFSTTKLDNDWDKPNPKSALFFRPKDIPQEPSLRGEIAVENTIVVKE
NVEVEDPSKKSEQIADDIIAAVKGPHVDGYPFVTKNTYKIAPESKESMLLRKLTAKKTAK
VTGDVTPRGDLSPAGRNLLNKISKRRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG