YALI0F24497g

Overview

Description highly similar to uniprot|P39990 Saccharomyces cerevisiae YEL026w SNU13 component of the U4/U6.U5 snRNP
Locus type CDS
Locus tag YALI0F24497g

Location

Species Yarrowia lipolytica Positions 3187413..3187822
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 410 (nuc.)
Previous locus YALI0F24475g Next locus YALI0F24519g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24497g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24497gYALI0F24497g_mRNA-001YALI0F24497g_CDS-001

Nucleotide sequence

 

>YALI0F24497g
ATGTCTGAGCCCAACCCCAAGGCCTTCCCCCTCGCCGACGCTGCTCTCACCCAGCAGATT
CTGGACATTGTCCAGCAGGCTACCCATCTTCGACAGCTCAAGAAGGGAGCCAACGAGGCC
ACCAAGACCCTCAACCGTGGTATCTCTGAGTTCATCATCATGGCCGCCGACGCCGAGCCC
ATCGAGATTCTTCTCCATCTCCCCCTCCTCTGTGAGGACAAGAACGTTCCCTACATCTTC
GTTCCTTCCAAGGTTGCCCTTGGCCGAGCCTGCGGTGTCTCTCGACCCGTTATCTCCGCC
TCTGTCACCTCCAACGATGCTTCTCAGCTCAAGGACCAGATCATCCAGATGAAGGACAAG
ATCGAGCGACTTCTCATTTAATTTAATGTATTATATGACTTCGAACGGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24497g_CDS-001

Protein length: 127 aa.
Product: Component of the U4/U6.U5 snRNP, putative

>YALI0F24497g_CDS-001 MSEPNPKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEP
IEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDK
IERLLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG