YALI0F23903g

Overview

Description similar to uniprot|P30606 Saccharomyces cerevisiae YOL103W (ohnolog of YDR497C) ITR2 myo-inositol permease
Locus type CDS
Locus tag YALI0F23903g

Location

Species Yarrowia lipolytica Positions 3136652..3138349
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1698 (nuc.)
Previous locus YALI0F23889r Next locus YALI0F23925t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23903g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23903gYALI0F23903g_mRNA-001YALI0F23903g_CDS-001

Nucleotide sequence

 

>YALI0F23903g
ATGTCGCTGGACAAAAACCGCCAGATCACGACCTCTGAGTCGTCGTCTGGAAGCAGTGCC
GATGAAGGGACCCATATCATGAGAGGCCTGACCAGTACTAGTACTCAGGACGAGACCACT
GGTTCCATTTCGGAAGGCAACCTAGAAGCCGAGAAAATCTCGCCGTTTGTGTTTGTGCTG
GTTGCCCTGGCCTCCATTTCCGGATTCCTGTTTGGATACGACACGGGCTATGTTTCTGGA
GCTCTGGTGGTCATCAAGGAGGATCTTGGACGTGCCCTTTCCAACGGAGATAAGGAGCTG
ATTACTGCTTCCACGTCCCTGGGAGCTCTCCTTGGAGGAGTTATTGCCGGAGCCATGTGC
GACTTCTTTGGCCGAAAGTGGGTTATCACCTTTGCCAATATTCTGTTTCTGGTTGGAGCT
GCCATTCAGTGTGGAGCTCACGCCGTGTGGACCATGATCGGAGGCCGATTCGTCATGGGA
TGGGGCGTGGGTATTGCATCTCTATGTGCTCCTCTGTACATTTCCGAGCTGGCCCCCACT
CGAATCCGAGGTCGTCTTGTCGTTCTCAACGTCCTGGCTATCACCGGAGGACAGCTTGTG
GCCTACGGAATTGGTGCTGGCATGGCCCACGTGCACCAAGGATGGAGAATTCTAGTTGGT
CTGTCTATGGTGCCTGCCTTTGTGCAAATGGTCATCTTTGTGTTCATGCCCGAGACTCCT
CGATATCTTGTTCGAAAGAATAAGATTGCTGAGGCCAAGAAGGTGCTGGCCAAGACATAT
GCCACCGATGACGACAACCTTCTCGACCGAAAGCTCCACGAACTCATGCTCCACAACGCA
TACAAGGAGTCCGGCCTGTCCACTATGGCGCGAGCTCGAAACACTATGAAGGAACTTTAT
TGCGTACCCAGCAACTTGCGAGCCCTCATAATTGCTTGTGGACTGCAGGGAATCCAGCAG
TTTTGTGGTTTCAACTCGCTCATGTACTTTTCTGCTACCATTTTTGAGGTGGTGGGCTTT
GATAACGCCACAGCCGTCTCCATCATCGTTGCTGGAACGAACTTTGTCTTCACCATTGTC
GCCTTTATGGTCATTGACCGTATTGGACGACGCCGAATTCTCCTGGGAACCATCTGGGGC
ATGTCTCTGGGACTCGTTGTCAACGCCATTGCTTTCCACTTCCTTGACAAGCAGAAGGAA
AAGAACCCCAACCATGAGCTCGATAAGGAACACATTTCCGGATGGGCATACGTGGTCCTC
GTTGCTCAGCTCGTCTACGTCGCCTTCTACGCCACTGGTATCGGTAATGTGCCATGGCAG
CAGTCGGAGCTGTTCCCCATCTCCGTCCGAGGTGTTGGAACTGGCATGGCCACTGCCACC
AACTGGGCAGGATCGCTCATTGTGTCCTCCACTTTCCTGACCATGTTGGAAAATATCACC
CCCACTGGAACATTTTCCTTCTACGCCGGTCTCTGTGCTCTCGGAGAAGTGTTTGTCTTC
TTCCTGTATCCCGAGACTTCCGGCATGGATCTGGAGCAGATTCAACAGCTGCTGACGGGA
GGTTTCAACATCAAGGAGAGTATGCGGCTGTCTGATGAGGCCAAGAGAGGCTACAAGAAG
TAGTCGTGCTTGTACGAGTAGGAACAACGAACATTATTTATTAGTTGCAATAGCGCAAAT
TGATTGTATACTACTGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23903g_CDS-001

Protein length: 541 aa.
Product: Myo-inositol transporter, putative

>YALI0F23903g_CDS-001 MSLDKNRQITTSESSSGSSADEGTHIMRGLTSTSTQDETTGSISEGNLEAEKISPFVFVL
VALASISGFLFGYDTGYVSGALVVIKEDLGRALSNGDKELITASTSLGALLGGVIAGAMC
DFFGRKWVITFANILFLVGAAIQCGAHAVWTMIGGRFVMGWGVGIASLCAPLYISELAPT
RIRGRLVVLNVLAITGGQLVAYGIGAGMAHVHQGWRILVGLSMVPAFVQMVIFVFMPETP
RYLVRKNKIAEAKKVLAKTYATDDDNLLDRKLHELMLHNAYKESGLSTMARARNTMKELY
CVPSNLRALIIACGLQGIQQFCGFNSLMYFSATIFEVVGFDNATAVSIIVAGTNFVFTIV
AFMVIDRIGRRRILLGTIWGMSLGLVVNAIAFHFLDKQKEKNPNHELDKEHISGWAYVVL
VAQLVYVAFYATGIGNVPWQQSELFPISVRGVGTGMATATNWAGSLIVSSTFLTMLENIT
PTGTFSFYAGLCALGEVFVFFLYPETSGMDLEQIQQLLTGGFNIKESMRLSDEAKRGYKK
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG