YALI0F23925t - Ylli_pol

Overview

Description Ylli relics, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli
Locus type mobile_element
Gene name Ylli_pol
Locus tag YALI0F23925t
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3138723..3139263
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 541 (nuc.)
Previous locus YALI0F23903g Next locus YALI0F23947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23925t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23925tYALI0F23925t_mRNA-001YALI0F23925t_CDS-001

Nucleotide sequence

 

>YALI0F23925t
AGGTACTCAGGGGACGACGCCACCCTGGGACATGTCCAACAGGGTTTGCTTCAATTCCTG
AAGGAAGCCCAGATGTGTTTCTACGATGGACAACCGCCAGCACTTCACGATGAGCGAGAG
TAGAGACAGTAGCAAGCGCAAAAGGCGGCCGAGGCCACCGAGAGAACAGCGTAGCAGGGC
GCGTAGTCACCACAGGGGACGCAGAACCAAACCAATGACGAAGAAGAACCACAAGGAGAC
GTTTTCAAAGGCAATGCAAATGAAGAGGGCAATGGAAGGATTGAGATTAGAGAACTGGAG
ACTGGAGTGGCGTTTTCCCGATGAACGAACAAACACGCGAAGCTATGTGGACCAACATAC
AACACGGACTGAACCAGGTTTTTTTATGATTTTGTTACTGGAAATAGGTACGTGCCAAGT
TGGACCATGAAACTAAACGTGTTTAATTAGTAATATTCGTGTAAGCGTACATTCATTTCA
AAGGTTATTCTTTCACGGCAAAGTTATAATTAAATGAATGTATATGCAGAAAAAAAAAAA
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23925t_CDS-001

Protein length: 41 aa.
Gene: Ylli_pol

>YALI0F23925t_CDS-001 RYSGDDATLGHVQQGLLQFLKEAQMCFYDGQPPALHDERE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG