YALI0F23573g

Overview

Description some similarities with uniprot|G0S2C1 Chaetomium thermophilum CTHT_0016710 phosphatidylinositol-4-phosphate 5-kinase
Locus type CDS
Locus tag YALI0F23573g

Location

Species Yarrowia lipolytica Positions 3090078..3094423
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 4346 (nuc.)
Previous locus YALI0F23551g Next locus YALI0F23595g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23573g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23573gYALI0F23573g_mRNA-001YALI0F23573g_CDS-001

Nucleotide sequence

 

>YALI0F23573g
ATGAACGAACTCAAGCCATACACGTTGCCTCAGTTCCAGTCCGCTAAAGCTGCTGCCGCC
GCCGCCGCCAAAGCGGCTGCGAAGAACAAGAAGCGGTACGAACAGACGCAGAAACAGGCC
CGCAAGCAACAGAAGCAGTACTCAACCTCGGGTTTCGTGTCCGCAGGCGTACCTCCCTCG
AACGTGACGCCCTCGCCACCTTCCGACTATTCTTTTACGGGTTATTCTCCCCGTACTTCC
ACTTCATCCACGTCGTCGCTCTACGAGGACGACCTACGTTCTGTGGCTGCGACTACTACC
ACGAACGCTACAACCACAGCGCCATCTATTCGCTCATCGTATTCGACTTACGGATACCCC
TCTGGAGTGTCTGGTATCTCGTCTCTCTCTGGCATCGGTATTTCAGGCCCTTCTTTTCCA
TTGTCCCAACCAGCGAACTCAAACTACGTTAACAATAGCCCTAACCGCGCCCCCAAACAG
GACTGGTCCCAGCACAATCATCATCAACAAGCGTTTGTTTTGCCTCAGGAGCCTTGTGGT
AAAAACACTGACCGAGCAACACAGACAGAGGACCGGGACATTCGTGGCACAGACGCAAGT
GTCGCAAACAGCCGCAGCGCAACCCACGACCACGAGTTTGACTTTGAACAGGACGACCCC
AGTCTCTACACGAAGGCCACTCCACAGCACAGCCCCCCCGGGCCATCTATCTCCAAAATT
CCGCACTCGTTACGAACATCGACGGTCGCACACAGTGGTGTCTTGCCGCTGTCGTTCGAC
TCGTCTGATGCTCACACGGCGTACTCGGCCAAGTCTGCCGAGACGGCCGACACTGCTCGA
GTAGGGGAGTCCGACAAAGCTGATGACAACGAAAGCTTTGTGCTGACCGACGTGAGAGAT
GATGCGAGCCACAAAAACACACATGGCCACAGCAAGCATCATACCAACGGACACAAGCAC
AACCTGACCAACTTGGTGAGCCAGGTGCCGCTCCCTCTCCATCATATTCCGCATCACAAA
CACAAAGATAAGGATTACAAACCCGAGTATATTGATTTGACCAGTGCTTCGGAAAGACAG
GAGGATGAGGACAAGCAAATGTCCTCCGAGCACAAGGAGGAGGAGGAGGCCAAGCATGGC
CACAACACCAGTACCAACACCAACACCATCACACATCATACTTATGCATCTACTCTCGAC
CCGAAACACATTCAGGTTCATTCTCTCGGCGTCCCTGAGTCTCCAACTACACAGCAGCAG
TCTCAGCCGCAGTCATCGTCTACGCCACTGGAACACACACATCTCGAATCGGTGACCACC
ACACAGCCACAGTCACCGTCGCCGGAGTCGACCACCGTGTCCCCCACTAACAGCGTGTCG
CCAGCATACCTGTCGTCGCTGTCATCTTACAACAACGACGATGAGATGGCCCCCGAGATC
AAGGAGGACGAGTTCTTTGACGCGGAGGAGAATGTCACCGCTGCTGACGCCGCCGAAGTG
TCAGCGGGCTACTTTGCGACCCACCGACCAGTGCACCATAGCGCCGAGGAGATGGGGGTA
GACCCTCTAAGCGTGGAGGACGCGAGCAGCGCCACCGACACCGGCACCGGCACCGACAAG
ACAAGCATTATCGACACAGTCCAAGGCGACGACACCGGCGCCACGACGGACACCAACACT
GACACCAACACAACAACGCCGGCACAGGCGTCCTCTTCGACTGACACATCCAGCAACACC
GTCAAAAGCCCCTCTGCCATTGCATCTCCGGCCCAGGGCTCTTCTGGCGCTGAGACATAT
GCTGATGCTGGCAACAACCACGCATCGGGTCTGGTGCCTCCTTCGGCGCCCTTCTCATCG
CCTCTTCTCAAAGAGCAGTCGCCACCCATGACCCGTCGTCAGACAGCTCCTCCTACTAAC
ATGCCTGCGCAGCCGTCTTCCGCGACTTTGCATCCTCCCCACGCCGCCCACCGGCCGTCG
CATTCCTTTTCTCGGCGGCGATCTGTACCTGTCCAGACCCACGGACACAACCACCCCGAC
TGCATCCAGTTGCTGGACGAGAATGAGCAGAATGAGGTGAACCGGCTGCGGGACTCTATC
ATTGCGCAGCGTGAGTACAAGAAGAAGCGTCGTGAGTTTGTGGAGGATGACAAGGTTCTT
GTGGGCACCAAGGTGAGCGAGGGCCACGACAATTACGTCACTGCATACAACATGTTGACG
GGTCTACGGGTTGCTGTTTCGCGGTGCAACGCCAAGAACGACAGACCTTTGACTGACGAG
GATTTTACCGCCCGACACAAGCTGGCCTTTGATATAGTTGGCAACGAGCTGACTCCTTCG
GCTAAGTACGACTTCAAGTTTAAGGACTACTCTCCCTGGGTTTTCCGACACTTGCGAGAG
CTGTTCAAGCTGGACCCGGCCGACTACCTGATGTCCTTGACCTCCAAGTACATTGTCAGC
GAGCTGGGCTCTCCTGGTAAATCTGGATCTTTCTTTTATTTCTCTCGGGACTACAGATTC
ATCATCAAGACGATTCATCACTCGGAGCACAAGCAGCTGCGCAAGATACTCAAGGACTAT
TACAACCACGTCAAGGCCAACCCCAACACTTTGATTTCGCAGTTCTACGGCCTGCATCGA
GTCAAGCTGCCCTTCGGTCGTAAGATCCACTTCATCGTCATGAACAACCTGTTTCCTCCC
CACAGAGATATCCACCGGACGTTCGATCTCAAGGGCTCTTCAATTGGAAGAGAGCTGCCT
GTTCCTCTCCCTACCACTGAGGAGGAGGAGGCTGCGCTAGCCCAGGGAGAGAACCTCCAG
AACGCCGCCATGGTGTTCAAGGATATCAACTGGATCAAGGCCAAGCAGACGATCAACCTG
GGTCCCACCAAGCGAGACCAGTTCCTCAAGCAGCTGCAAGTTGATGTGGAGCTTCTCAAG
CGGCTCAACATCATGGACTACTCGTTGCTGATTGGTATCCACGACTTGAAGAGGGGAAAC
ACAGAGGGTCTGCGAGACAATCTGCTGTCAGTATTCCAGCCCGTGGACTCTAACAACACG
TCGGGTAAGCCGGATGAGCTGAGGAGGGTGATTAGTGCAACTAGCCCCACGGCATTCAAC
ACACAGGATATGCCTTATGTTGTCAATGAGTGAGTATTACTATGGTATTAGGGATGGAAC
ATCTACAACACTAACATGAACGAAAACTAACACAGACACTCTAGCTTGCGCTTTTACGCG
GATGATGGTGGCTTCAGATCAACCAACGAGGAGGATGAGCCTCTCGATGAGATCTACTAT
CTTGGTATCATCGACTGCCTCACTCCTTACGGCTTTGTCAAGCGAGTGGAGACTTTCTGG
AAGTCCCTCAAGCATCCTCGATTTGCCCTCTCGGCTATTCCATCGACGGAGTATGGTGAC
CGGTTCTTCAACTTCATGAAGTCAGTCGTCAAGTCGCCTCCAGCACAGGAGAAGCCTAGT
CGGGGGCGGAGGCTATTCAACAAGCTAACTAAGCCGATCCAATCAACTTCTCAGGGCGTC
AGCCAAGGCGTGCAGCACCTCACAAGCCCTATTTTTAACCAGGGCAATGCGAGCACTTCA
AGCTTCCAACACCACCCAAACCATCAGCATTTGCATCAGGGCCACCACTTCGCCGGCTTC
TCGGGCTACCATACTCATAGTCCTCAGCACAGTACCGCTACACCCACAGCGACAGTTAGC
TCTGCCACTTCTGCCACTCCTGTGCCTTCACCAGCTCAGAGAAGCAGCTCCATCGGTTCG
GCGGCAGGTGTGCCTCGGTGCAACTCTCTGGGAGCCCCCGGCCGAACTTCTTCGTTTGGA
CGGACAGACTCCATCTCGTCGGTGACGTCGACCCACACTGCTCGATCCGGAAACACTGGC
GCTGCCAACAAACCCATCAGCAAACCCGTCAGTAAACCCGTCAACAAACCCGCTCTCAAT
TCCATGCCTCCTCCGGCCAGCAACAAGCCGCTGGCTCGGACTTCGCAGGATATTGATATC
AATGTTCTCCCCAGTTTGAAGGAGGTCGAAACCCGAGCTCCTTCGTTGAAAACTGAGATG
AGCCGGGAGTAACAGGCAGCACCGCCCATACGTGCTCTGGTGCTGGACAAAAAAACACCA
AAAAATGATCATACAAATCGTGATTATATATATATTTACTTCTTTCTGGACTCGCATCGC
ACTGTTACACAAACACATCTTGACAGCGCTGTGCCGCTCTTCGCTCATTCTTTGGCGAAA
GCATTCTCCCGTTGTCGTCACACGATACGACAGCATTTGGCATCGGCTTGTATTTCTTGG
CATGAATGGATTATTTGGAATTTTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23573g_CDS-001

Protein length: 1342 aa.
Product: Phosphatidylinositol phosphate kinase, putative

>YALI0F23573g_CDS-001 MNELKPYTLPQFQSAKAAAAAAAKAAAKNKKRYEQTQKQARKQQKQYSTSGFVSAGVPPS
NVTPSPPSDYSFTGYSPRTSTSSTSSLYEDDLRSVAATTTTNATTTAPSIRSSYSTYGYP
SGVSGISSLSGIGISGPSFPLSQPANSNYVNNSPNRAPKQDWSQHNHHQQAFVLPQEPCG
KNTDRATQTEDRDIRGTDASVANSRSATHDHEFDFEQDDPSLYTKATPQHSPPGPSISKI
PHSLRTSTVAHSGVLPLSFDSSDAHTAYSAKSAETADTARVGESDKADDNESFVLTDVRD
DASHKNTHGHSKHHTNGHKHNLTNLVSQVPLPLHHIPHHKHKDKDYKPEYIDLTSASERQ
EDEDKQMSSEHKEEEEAKHGHNTSTNTNTITHHTYASTLDPKHIQVHSLGVPESPTTQQQ
SQPQSSSTPLEHTHLESVTTTQPQSPSPESTTVSPTNSVSPAYLSSLSSYNNDDEMAPEI
KEDEFFDAEENVTAADAAEVSAGYFATHRPVHHSAEEMGVDPLSVEDASSATDTGTGTDK
TSIIDTVQGDDTGATTDTNTDTNTTTPAQASSSTDTSSNTVKSPSAIASPAQGSSGAETY
ADAGNNHASGLVPPSAPFSSPLLKEQSPPMTRRQTAPPTNMPAQPSSATLHPPHAAHRPS
HSFSRRRSVPVQTHGHNHPDCIQLLDENEQNEVNRLRDSIIAQREYKKKRREFVEDDKVL
VGTKVSEGHDNYVTAYNMLTGLRVAVSRCNAKNDRPLTDEDFTARHKLAFDIVGNELTPS
AKYDFKFKDYSPWVFRHLRELFKLDPADYLMSLTSKYIVSELGSPGKSGSFFYFSRDYRF
IIKTIHHSEHKQLRKILKDYYNHVKANPNTLISQFYGLHRVKLPFGRKIHFIVMNNLFPP
HRDIHRTFDLKGSSIGRELPVPLPTTEEEEAALAQGENLQNAAMVFKDINWIKAKQTINL
GPTKRDQFLKQLQVDVELLKRLNIMDYSLLIGIHDLKRGNTEGLRDNLLSVFQPVDSNNT
SGKPDELRRVISATSPTAFNTQDMPYVVNEHSSLRFYADDGGFRSTNEEDEPLDEIYYLG
IIDCLTPYGFVKRVETFWKSLKHPRFALSAIPSTEYGDRFFNFMKSVVKSPPAQEKPSRG
RRLFNKLTKPIQSTSQGVSQGVQHLTSPIFNQGNASTSSFQHHPNHQHLHQGHHFAGFSG
YHTHSPQHSTATPTATVSSATSATPVPSPAQRSSSIGSAAGVPRCNSLGAPGRTSSFGRT
DSISSVTSTHTARSGNTGAANKPISKPVSKPVNKPALNSMPPPASNKPLARTSQDIDINV
LPSLKEVETRAPSLKTEMSRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG