YALI0F23595g

Overview

Description weakly similar to uniprot|P36775 Saccharomyces cerevisiae YBL022c PIM1 ATP-dependent protease, mitochondrial
Locus type CDS
Locus tag YALI0F23595g

Location

Species Yarrowia lipolytica Positions 3097525..3100436
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2912 (nuc.)
Previous locus YALI0F23573g Next locus YALI0F23617r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23595g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23595gYALI0F23595g_mRNA-001YALI0F23595g_CDS-001

Nucleotide sequence

 

>YALI0F23595g
ATGGACGCAACTCTACCTCTGCTGACTCTGCCGGCCGACACAGTTGTGCTGCCCGGTGTG
AGCATGAAGGTGGGCTTGAGTAAGGAGACCGCTGTGGCCATGCTCAAGCTGTTTGAGAAG
CCCAAAGATAAGGACGTGGCGTACTCCAAGGCCACGCAAGACCTAATGAGCAGTGTCAAC
AAGCTGCAGGCCTTCTTCAAACTCAAGCGAACTTCTGCTGACGGGTACAGAAACGCAAGT
CTGATCACCATTGCTTGCGTACCCCGCATTACCCAGAAGCAGATCAAGGAGACCGGCGAG
AACAACGAGGCCGGTGCCCACGACAGTGAGAGCGTGACTCCCGTGCTGGGCACCAACTCC
ACCGAGGTCAATACCTCTGTCTACTCCTTTGGAACCGTGTGTCGAATCGTGCGGTTTGAG
CGATCTGGTACTGAGGACTTCCAGATTGTCGTGGAGGGTCTGTCCCGTTTGGAGCTCGGC
CAGCTGGTCGACAAGTCCGGTCTAGTGCCCACAGCTCGAATCAAGGTCCGAGTTGACGAG
GACGGTGAGTCTGCCTCTTCTGACGAGTCCAGTGACAAGGAGCCCACATGGAGCAAGACC
GAGTTGTCGCAGCTGGAGGTGTTGCACGCCTCCGCTAAGGAAATTATCGATCTGGCCGCC
AAGAGTAATGCCACGCAGTTCTCCAAGCTTATGGCTTCGCAGACCACAGTGGCCGCTTCT
GTTATGAAGCAGCTGACCAAGCTGGGTCCTAACCCCGGATCGGCACGAGATACCCGAAAG
ACCGCTGGTATGCTGGTTGATCTGCTCATGGCCATTCTCCCCACCGACTTTGAGGACAAG
ATCGCGGTTCTGGCTGCCTTCTCGATTCCCGAGCGAATTGCCAAGGGCTCCGAGATTCTC
AAGACCAAGCTCGACATGATGAAGATCACCGAGAAGATCGACTCGACCGTGGACTCCAAA
ATGAACAAGCAACAGCGAGAGTACCTACTTCGACAGAAGATGCGAGCCATCCAGGAGGAA
CTTGGAGAGACCGACGACCGAGGAGAGGACGATGATCTTAAGGAGCTCACCCAGAAGCTG
CAGAGCCTCAAGCTGAGCCCAGAAGCCGACAAGGTGGTATCCCGAGAGCTCAAGCGAATC
AAGCGAATGCCTCCCACTCAGGCTGAGTACCAAGTCTGCAGAACTTACCTTGAGACGATT
GCCGAGCTGCCATGGGACAAATGTACCGAAGACACTGTTGTGACAGTCGACCAGGCTCGA
ACCATTCTGGACAACGATCATTACGGTCTTTCTCATATCAAGAAGCGTCTTTTGGAGTAC
CTTGCTGTTCTGCGACTCAAGTCTCTGCGATCTGAGTCTGAGGTTGCTCAAGAGGAGACT
GCTGCTGCTGCTTCTTCTGAGGGCCCCAACGGCCAGCTTGACGACTCGGCCAAGCCCATC
GACTACTCCAACCGAGCCCCCATTCTGCTGCTGGTTGGCCCTCCCGGTGTTGGTAAGACC
TCTTTAGCCAAGTCTGTGGCTCGAGCTCTGGGCCGAAAGTTCCAGCGGCTGTCTCTCGGA
GGTGTTCGAGACGAGTCCGAGATCAGAGGTCACCGACGAACCTACGTTGGTGCCATGCCT
GGTCTGTTCATTCAGGGTCTTCGACAGGTCGGGGTGAACAACCCTGTCGTTCTCCTTGAT
GAGATTGATAAGATTGGAGGCGCAAACTTCCACGGGGACCCTGCCGCTGCCATGCTGGAA
GTGCTGGACCCCGAGCAGAATGCTACTTTCCGAGACCATTACATCAACTTCCCCGTTGAT
CTGTCCAAGTGCATTTTCATTGCCACCGCCAACAACCTCGACACCATTCCCGCTCCTCTT
CTGGACCGAATGGAGACCGTTCACCTGGAGGGTTACACCTACATGGAGAAGCTTCATATT
GCCAAGAAGTACCTTGTCCCCAAGCAGACTAAAGCCAACGGTCTTGAGGTTGACCAGGTT
GTCATTCCCGACGACGTTCTGCTTCACATTTGCACTAAGTACACCCGTGAGGCCGGCGTT
CGAAACCTCGAGCGAAAGATTGGCGCTGTGTGTCGAGCCAAGGCTGTAGACTACGCCAAG
TCTCTCTCCGCCGACGACGGTGAGCTGATTACTGTTGTAGACGAGGCCAAGAAGGGTGCT
CACTCGTCCTACGATCCCGTGGTGACCATTGAGAATCTCACCGACATCCTTGGAATGGAG
GTTTACACTGATGAGGACGCTCAGGACGCCAAGGAGGAGCCCAACTCGTCGCACATCGGT
GTTGTCAACGGTCTGGCCTACATGGGCACTGGTAATGGAGGTCTTCTCAAGTTTGAGGCC
ACCCAGATGCCCGGTAAGGGTCAGCTCAAGCTCACCGGAAAGCTTGGAGATGTCATTCAG
GAGTCTGCGCAGATTGCCCTTTCGTGGGTCAAGAGCAATGCTGCTGCTCTGCATATCGAC
ACCGACTTTGACAAGGTGGATATTCATTTGCATGCCCCCGCCGGTGCTATCCCCAAGGAT
GGACCTTCTGCTGGAGTTGCCATGACTCTTGCATTTGTGTCTCTGTTTATGGGTAAGCCG
ATCCCTCCTTCTATTGCCATGACTGGAGAGATGACTCTTCGAGGCCGTGTTCTACCTGTT
GGAGGTATTCGAGAGAAACTTCTTGGCGCTCATCTTGCTGGCGTCAACCGAATCATGCTG
CCTCTTGCTAACAAACGAGACGTGGATGAGGAGCAGCGAAAGGGCGGAGACGGCGGTGTT
CTTGACAAGATGGAGATTTCTTATGTCAAGTACATGTGGGACGTTTTGGAGCTGGTCTGG
GACCTTCGATTTGATCCTATGATTGAGTCTCGATTGTAGACGGTTATTTTTTGTATTAAT
TAGATGAATTTATTGTGTTTTTTATTTGAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23595g_CDS-001

Protein length: 953 aa.
Product: Conserved hypothetical protein

>YALI0F23595g_CDS-001 MDATLPLLTLPADTVVLPGVSMKVGLSKETAVAMLKLFEKPKDKDVAYSKATQDLMSSVN
KLQAFFKLKRTSADGYRNASLITIACVPRITQKQIKETGENNEAGAHDSESVTPVLGTNS
TEVNTSVYSFGTVCRIVRFERSGTEDFQIVVEGLSRLELGQLVDKSGLVPTARIKVRVDE
DGESASSDESSDKEPTWSKTELSQLEVLHASAKEIIDLAAKSNATQFSKLMASQTTVAAS
VMKQLTKLGPNPGSARDTRKTAGMLVDLLMAILPTDFEDKIAVLAAFSIPERIAKGSEIL
KTKLDMMKITEKIDSTVDSKMNKQQREYLLRQKMRAIQEELGETDDRGEDDDLKELTQKL
QSLKLSPEADKVVSRELKRIKRMPPTQAEYQVCRTYLETIAELPWDKCTEDTVVTVDQAR
TILDNDHYGLSHIKKRLLEYLAVLRLKSLRSESEVAQEETAAAASSEGPNGQLDDSAKPI
DYSNRAPILLLVGPPGVGKTSLAKSVARALGRKFQRLSLGGVRDESEIRGHRRTYVGAMP
GLFIQGLRQVGVNNPVVLLDEIDKIGGANFHGDPAAAMLEVLDPEQNATFRDHYINFPVD
LSKCIFIATANNLDTIPAPLLDRMETVHLEGYTYMEKLHIAKKYLVPKQTKANGLEVDQV
VIPDDVLLHICTKYTREAGVRNLERKIGAVCRAKAVDYAKSLSADDGELITVVDEAKKGA
HSSYDPVVTIENLTDILGMEVYTDEDAQDAKEEPNSSHIGVVNGLAYMGTGNGGLLKFEA
TQMPGKGQLKLTGKLGDVIQESAQIALSWVKSNAAALHIDTDFDKVDIHLHAPAGAIPKD
GPSAGVAMTLAFVSLFMGKPIPPSIAMTGEMTLRGRVLPVGGIREKLLGAHLAGVNRIML
PLANKRDVDEEQRKGGDGGVLDKMEISYVKYMWDVLELVWDLRFDPMIESRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG