YALI0F23529g

Overview

Description similar to uniprot|P38555 Saccharomyces cerevisiae YER031C (ohnolog of YGL210W) YPT31 GTP-binding protein of the rab family
Locus type CDS
Locus tag YALI0F23529g

Location

Species Yarrowia lipolytica Positions 3086025..3087015
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 991 (nuc.)
Previous locus YALI0F23507g Next locus YALI0F23551g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23529g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23529gYALI0F23529g_mRNA-001YALI0F23529g_CDS-001

Nucleotide sequence

 

>YALI0F23529g
ATGAGCTGGGATTATATTGCCAAAATCGTCATGATTGGAGATTCGTGAGTATTCAGGGGT
CTAGGTGTCCCAGATGCTGGTTAAAGGCGTTCATGGCGGGGCGGGTGGCAAAAGGGGCGG
CATATGTTGCGGTGGGTATCATGTGCAGCAGCCTTTCGCTCAAATAACCCACCATTGCAT
GTCCCGCCATACGTCTTGCCATGACTCAAACGCAGATATCATTCCTTTCTGTTACCATAC
TAACACCAGAGCATGCGGAAAGTCGTCCCTGACTCTAAGACTGACTGATGACACATTCAG
CGAGTTCCATGATGTCACTATAGCCGCGGAGATCGGCTCCAAGGTGGTAGACATTGACGG
AAAGGAGAAAATGAAGCTTCAGATCTGGGACACGGCAGGGCAGGAGCATTTTCGGGCCGT
GACCCGGTCGTATTTCCGCAACGCTGCGGGCTGCTTGCTGGTCTACGATATCACGCGCCC
CAAGACGTTTGCCAACGTGCAAATGTGGCTGGGGGAGTTGCGGGATCAGGCTGACGAAGA
TATCATCATCATGCTGGTGGGCAACAAGACGGACGTTGGAGCGCGTCAGGTGGAGGCTGA
GGAAGCCCGAAAATGGGCAGATGAAAATGGTCTAGCCGGGTTCATTGAAACGTCAGCCAA
GACAGGAGACCAGGTACTAGAGGCGTATCAGCGGGTGGCTCAGAAGATCCACTCCAATAT
CAAGACTGGCAAGACCAATATCAATGATAAGAGATATGGAGTTCGTGCAACGACTACTGG
AGGAGCTCAGCAGCTGAATTTGGACGAAGGCGATGTTAAGAAGAGTGGATATTCAGCATG
CTGCTAGCGAGGTAGAGGTCCGAAACGTGTATATAGAATTTATGACCATGCGACCAGTGC
AATACTTTACACTACACAGTACAAGTACTCCTGTTTCACAGGCACCTCTACAGCAACTGA
TATACTGTAATTAGATATTCATCTTCACTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23529g_CDS-001

Protein length: 214 aa.
Product: Rab family GTPase, putative

>YALI0F23529g_CDS-001 MSWDYIAKIVMIGDSACGKSSLTLRLTDDTFSEFHDVTIAAEIGSKVVDIDGKEKMKLQI
WDTAGQEHFRAVTRSYFRNAAGCLLVYDITRPKTFANVQMWLGELRDQADEDIIIMLVGN
KTDVGARQVEAEEARKWADENGLAGFIETSAKTGDQVLEAYQRVAQKIHSNIKTGKTNIN
DKRYGVRATTTGGAQQLNLDEGDVKKSGYSACC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG