YALI0F23507g

Overview

Description some similarities with uniprot|Q9P3E0 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0F23507g

Location

Species Yarrowia lipolytica Positions 3082842..3084992
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2151 (nuc.)
Previous locus YALI0F23485g Next locus YALI0F23529g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23507g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23507gYALI0F23507g_mRNA-001YALI0F23507g_CDS-001

Nucleotide sequence

 

>YALI0F23507g
ATGCGTGACCAGCATGAAGGCGAAAATATACTGTTAATAACGCCATACCTACACATTGGC
AAACGCACTCTACACTACAATCATATATTCACCTCCTCAGGTTACTCTCTAGGGCTCTCC
AGTCTCCACTGCTATCACGGGTGGCAAAGTTACTATCAGAACCTTATCAGTTATCTGAGC
AGGCCCAAATCACTGCTCACAGCTCTCAAGCTAACTCTGCCCACGGCAAAGCACCACGGC
ATGTTTTCCGAATACGCATCGAAATTACTGACACAAAGCCAGGTCAAGTTTGGAAAAGAC
TCAAATGTGCCGCTATTCCACTCGGCCGTCGAAGAGGCCGAATCCAGCAATCACAACGGC
CACACCAACCACAACAATAACAACCACAGAGGCATCTACTCGCCGCGCCGACTATGGGAA
CACATGGAGGACGACGAGGAGGCGTCCAACGCGATTAACGCATCCTGGAACTCCAACTCG
GGTAGTGACAGCGAGACAGAAGGACCCAGCAACAGCTTTCTGAGAGCCGTAGAGGAGCCA
GGCAAGTCACACAAACAGCCCAAGGAGAGTTTTTTCCCTGTGGACTTTCTAGACCGAGAA
GACGGACAACCTGAGGAGGTTGGCAAGCAGCTCGAAGACTCAGAACAGAGTATTGAAGGC
GAACATTTCTTTCCTGCATCAACATCAGCAGCGGCAGCAGCAGCAGGTGTGCCTGTGGAT
CCCGAACACGGGCTGAATGAAGATTCCATGGCTTCCAGTATACCCCCTGAGTTGGCGCCT
CCAACCTCAGTATCGGATACCATAAAATATGACCAGGTATGGGGAGGAGTGTACCTGTTC
ATGTTGGCAGCGACGATCGCAACGTATCTTTTGGCGCTATTGCGAGGTGTTGATGGAGGA
GCTCCGACTGGATCTCCGTCTCTAACATTTCTACCACTGACAGTACTAGCTCATTACACG
GTGTTTGCAGTCGCAATCTCCTTGGTCTGGCTGCTGCTCCTACGAAAGTACTCTTCAGTA
ATGTTCTACTTTCTGGCTGCAGCCTTTCCGGTGGCTGTATGGACAGCTGCGCTCGTGACT
CTCTTTTCGGGAGGGTATTCATGGTGGGTGACTTTGGGACTCATGATCACGGGATCCATG
TGGCCTCTAGCATTCTGGAAGCACAAGGATTACGTGTCGCGTGCAGTCGGGATAATTCAG
CTCTCTTGTCGAATCCTCAGTGCTAACCACGTGCTTGTATTCTTGTCCTTTGCCTTCATG
ACCCTGTTTGTGCTCATCTCGGCCATCTGTGTCACAGCCATCGGCCAAGTCATGTATGGT
AAGAACATGCTTGTGAGCGCCTTGGGCATCTTCATGTACATGTGGACCTGGGGTATTCTG
AACGGCACTCAGAGAGCAACCATTTCTGCCACTGTCAGTCAGTGGTACTTTTACCGTCAT
CTCTTCCCGCACACTAGCTCGCGCCAGGTCTTGGCTGCAGCTCTTGGATATGCTCTCACG
ACTCAGTTTGGCAGCATCAGTCTGAGCTCCTTGTTGCATCTTACATTTCGCATTCCGGTG
CTGCTACTGTCACGGGTAGTTTCTCTCAGTGGTACCGTGACATCGGTGGTCGCGCCATGG
CCACTTCGAATGGTTCTAAACGTTGTGTCACCGGCATTGTACATTCTAGCAACCCCCTCC
GGGGTGCTCTCTATGAGCCCTCTGACTCTGACACTGGCTGTTATCAACTCTCAAAACCTA
AAGTCGTCTTCTCTGACTGTTCAAAACTTGCATTTCCGTCTCCCTGCAGCAGCATGGCGA
GTGCACAAGCTTGCGAAGCTTCTGCTGGTGGTAGTACGGGTTCTGACAGCTCTGTTGTTT
GCTGCCACCACTTGGGTTCGGGGACATCTTCTTTGGGAAGTGGTTCTCGCCTCATTCACG
GGTTGGTTTGTGCTTGGCAGTACCGAAGGTCTTCTCAGTATGATTGTCGACTCCATCTTT
GTCTGCTTTGCGCTTGATTCGGCCGCCCAAGGTGGACACTGTACGGAGGCCGACGTCCAC
TTCAACGGCGCCCATGAATACTAGATAGACACTCACACTCACACACGAACCCCACTTGAC
TGTGTTTTTCCAGTTCCCTATTTATTTATAATTAACATTTCATGCCCGCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23507g_CDS-001

Protein length: 688 aa.
Product: Conserved hypothetical protein

>YALI0F23507g_CDS-001 MRDQHEGENILLITPYLHIGKRTLHYNHIFTSSGYSLGLSSLHCYHGWQSYYQNLISYLS
RPKSLLTALKLTLPTAKHHGMFSEYASKLLTQSQVKFGKDSNVPLFHSAVEEAESSNHNG
HTNHNNNNHRGIYSPRRLWEHMEDDEEASNAINASWNSNSGSDSETEGPSNSFLRAVEEP
GKSHKQPKESFFPVDFLDREDGQPEEVGKQLEDSEQSIEGEHFFPASTSAAAAAAGVPVD
PEHGLNEDSMASSIPPELAPPTSVSDTIKYDQVWGGVYLFMLAATIATYLLALLRGVDGG
APTGSPSLTFLPLTVLAHYTVFAVAISLVWLLLLRKYSSVMFYFLAAAFPVAVWTAALVT
LFSGGYSWWVTLGLMITGSMWPLAFWKHKDYVSRAVGIIQLSCRILSANHVLVFLSFAFM
TLFVLISAICVTAIGQVMYGKNMLVSALGIFMYMWTWGILNGTQRATISATVSQWYFYRH
LFPHTSSRQVLAAALGYALTTQFGSISLSSLLHLTFRIPVLLLSRVVSLSGTVTSVVAPW
PLRMVLNVVSPALYILATPSGVLSMSPLTLTLAVINSQNLKSSSLTVQNLHFRLPAAAWR
VHKLAKLLLVVVRVLTALLFAATTWVRGHLLWEVVLASFTGWFVLGSTEGLLSMIVDSIF
VCFALDSAAQGGHCTEADVHFNGAHEY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG