YALI0F23485g

Overview

Description some similarities with uniprot|Q7S4C9 Neurospora crassa NCU02191.1 hypothetical protein
Locus type CDS
Locus tag YALI0F23485g

Location

Species Yarrowia lipolytica Positions 3077694..3079840
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2147 (nuc.)
Previous locus YALI0F23463g Next locus YALI0F23507g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23485g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23485gYALI0F23485g_mRNA-001YALI0F23485g_CDS-001

Nucleotide sequence

 

>YALI0F23485g
ATGGTGCGATTACAACGGCGGCTTGCGACGCTGGGAATTGCCATCCTCGGCCTCACCGTC
ATCTCCATCTCTATCTACTCTCTGTATGGAGACTCCAATCGGGTCCTGGAGTTTGCTGGA
GCCCATACAGACTGGAACTCACACAGCTCGGCACCAGTGGACTCAGATCCGCGACCAAAA
GACGATGCTCCAGCACCAATCGAACTGACAGCCGAAACCAAACCCGACACGGAAAAGCAA
TCTGCAGGCCAACGACCCAAATCACCCACGGCTCCCGCAGGTGTGGCCTTTGAGATGCAC
CCCGACGCTTTCCATGCTGGAGCTGACGCTAACCGACACATGGGACATGACGTGTGGCGA
CCACACGGATACGTCCCCTCATACCCTCTGGGAGGGGTTCATAGAGCTCCCGGAATCGAT
CCTCTGCAGGTGGGCAACGCTGGCGAGTTCATGCAGCAGAAGCTGGTGGCTGACTTTGCT
GAGGGATCGGACCGGCTGTTCCTCATGCTGAAGACTGGAGCCACCACATTTTGGAAACGA
ATGCCGATTCATGCTTACACAACTCTCACCCGAGTGCCTCATTTCGCCATCTACTCCGAC
CACCCCGATACCATCGCTGGCTATGAGGTTATTGATATCCTTGCCAACACCTCTCAGGAG
TACATGGACAGCCAGGACTTCCGACTCTACCGACAGCAGCAGAAGCTGCGAGAACTTCAC
AACCAGGTTGACTTTGGAACGATGAAGCTAGACGGAGGATGGGAGCTCGACAAGTACAAG
AACATCCCCATGCTGCAACACGCCTGGAACACAGACTCTACCAAGGACTGGTATGTGTTC
ATTGATGACGATACCTACGTCTTCTTCGATACTATGTTGGCGTGGCTCAAGGAGCTCGAC
CCCAAAGAGCCTCTGTACATGGGCTCACCTACCAGTGTCAAGGGTGTCACTTTTGCTCAC
GGTGGATCCGGTGTTGTTCTTTCTCATGGTGCAATGAAGGCTATGTTTGAGGACGCCGAG
ATTGCCGATGGTTTCGACACCCTGCAACATGAATATGAGGAACACACTGCATCTGTCTGC
TGTGGTGATTATATGGTTGCCAAGGTCCTGCTCGACAAGGCCAAGGTGAAACTCTCCATG
ACCTCAGCCAGCAAGTACCCTTACATTGCGCGAAAGATCCAGGGAGAGCCCATTACCACT
CTCAAGTTCTTTCAGGACAACTGGTGTCAGCCCATCACTACCTTCCATCATCTGACCAAC
CGTGACATCGAACTCATGTGGCAGTATGAGCGAAGCAAGGGTCCCGAATTCCGAAAACAC
ATTACCTACCAGGACCTCTACCACGACTTCGTCAAGCCCTACATTTCTGACGACGTTCGA
GAGGACTGGACCATTGAGCGAGAAGATACCGATGGTGATGGCCAGGAGAGTTCGCTTGCC
AAGGAGAAGGAGGATTGGAAGAACAAGCACACTAAGAAGAAGAGTGACGATGACGAGGAA
GACAAGGAGCCCGAGCAGGAGATTCCCCCCTTTGAGCCTCTCAAGGATTCCCCTCGACAG
TCCATCGACAAGTGCAAGGCGTGGTGTCAGTCCAAGGACTGGTGCTATCAGTTTGTGTAC
ACAGGCAAGGATGGTGATGAAAACTCCGTTTGCAAGATCAAGAAGTACCTGAGTCTGGGC
TATCCTGTGACCAAGGGCAAGAAGAAGCGAGTGGGATGGAACATTGAGCACATTCGAATG
CACTTGCGATGGTCCACTGACTGTGACGAGCTTGCTGGTCTGGAGGAAGCCGATGCCAAG
GGTCTTGATCCCGATGAGGGATGGTGGAAGTCTCGATTCCAGGCTGACAGGGAGGCCGAG
CGTCTTCGACAGCAGGCCGAGGAGCAGGGAGCCCAGGCCCCCGAGGGCGAAAATGAAGAT
CTCAAGATGAAGGAGGCCGAGAAGCAAGAAGAGGTCAAGGATGAAAAGAAGGAGGAGGAG
AAGCAGAAGGAGGAGAAGAAGAAGGAGGAGAAGAAGGATGAAAAGAAGGGGGATGAGAAG
AAGGAGTAATCCAATACTCATCTTCTCACGCAACATAACACGCACAGGAGTGACTGGAAT
CACTGACACATGGTTAATTATATAAGATATGAATACTTTTGGGATAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23485g_CDS-001

Protein length: 683 aa.
Product: Conserved hypothetical protein

>YALI0F23485g_CDS-001 MVRLQRRLATLGIAILGLTVISISIYSLYGDSNRVLEFAGAHTDWNSHSSAPVDSDPRPK
DDAPAPIELTAETKPDTEKQSAGQRPKSPTAPAGVAFEMHPDAFHAGADANRHMGHDVWR
PHGYVPSYPLGGVHRAPGIDPLQVGNAGEFMQQKLVADFAEGSDRLFLMLKTGATTFWKR
MPIHAYTTLTRVPHFAIYSDHPDTIAGYEVIDILANTSQEYMDSQDFRLYRQQQKLRELH
NQVDFGTMKLDGGWELDKYKNIPMLQHAWNTDSTKDWYVFIDDDTYVFFDTMLAWLKELD
PKEPLYMGSPTSVKGVTFAHGGSGVVLSHGAMKAMFEDAEIADGFDTLQHEYEEHTASVC
CGDYMVAKVLLDKAKVKLSMTSASKYPYIARKIQGEPITTLKFFQDNWCQPITTFHHLTN
RDIELMWQYERSKGPEFRKHITYQDLYHDFVKPYISDDVREDWTIEREDTDGDGQESSLA
KEKEDWKNKHTKKKSDDDEEDKEPEQEIPPFEPLKDSPRQSIDKCKAWCQSKDWCYQFVY
TGKDGDENSVCKIKKYLSLGYPVTKGKKKRVGWNIEHIRMHLRWSTDCDELAGLEEADAK
GLDPDEGWWKSRFQADREAERLRQQAEEQGAQAPEGENEDLKMKEAEKQEEVKDEKKEEE
KQKEEKKKEEKKDEKKGDEKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG