YALI0F23199g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F23199g

Location

Species Yarrowia lipolytica Positions 3044027..3045034
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1008 (nuc.)
Previous locus YALI0F23177g Next locus YALI0F23221g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23199g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23199gYALI0F23199g_mRNA-001YALI0F23199g_CDS-001

Nucleotide sequence

 

>YALI0F23199g
ATGGCTGCAACACTATCTCCGGCTTCGCCATCTGCCCCAGGACTGGCACGAGAGATCGAG
AAACTCCGCAAAACGGAGTTTACCGTCTTCATCAACCTGCAGCCTGGTCTGATGGTGTTT
ATCGAGTTTTTTCGAGCTAGCATCACAGTCCACGTGGTTGACGAGATGGAAGGCATGCTG
TACCGACACAAGGTGATGTTCATGGATGTCGGCATTGATACCAAAGTAGTGAACGAAAAG
TCGACTCGAGAATGGACTGGATACGATGCAAAGGCCCTCAATGAAAATACCATTGCCATT
TTTGTCTACCATGATGTCTTCAACCTCACTATTGAAGGACGAGGTGAGCTACGTCCCCTA
GTGGTTAGAGTGGGAGAATCAACTGATTGGATGGGCAGCTTTATGCCTCTATTTTCCAAA
ATTCTTAATATCAGTGACCAGATGGCAAAGACCAAGCCTGAGTCCACACCAGCTAAGGGC
TTCCGACTGCTCCACCGAGTTCCAGAGTCCACAAACTACATGATCGTGTGCAGTGACGGA
GTGACTATTCCTGTTCATTCACTTGTTCTTAAGTCGGTATGGCCCTATTTTGCCAAGCTG
ACGAGCTCAGAACCTGCCAAAATCAAAGAGGGAGCATGGGCTATGCCTTATGGGTCAACA
TGGGTTTTCCCGCTGATCAAATACTGCTATGGTGACCTGGAAACAATGAACTTTGAGGAA
GCAACGGGAGCGCTGATCCTAGCACAGAGATACGATCTACCAGAACTATCTCAAATTGTC
CAAAGACACATTCTGGGAAGTCCTCTGAACATTGAGACGTGCCTGCTGGGATGGAAACGA
GCCTTTGAGGGCAACAATAGCGTGGTGAGAATGTACTGTGCTCGACACTACTACCAAAAC
ATGAACCAGCTTGCCATCAGCAATACCTATGCTGAGCTTACCAAGGAGGAGTTGATCCAG
CTCGGAATAGATGCCGGTGAGAGTCTGAAACAGATTGAACGGAAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23199g_CDS-001

Protein length: 336 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F23199g_CDS-001 MAATLSPASPSAPGLAREIEKLRKTEFTVFINLQPGLMVFIEFFRASITVHVVDEMEGML
YRHKVMFMDVGIDTKVVNEKSTREWTGYDAKALNENTIAIFVYHDVFNLTIEGRGELRPL
VVRVGESTDWMGSFMPLFSKILNISDQMAKTKPESTPAKGFRLLHRVPESTNYMIVCSDG
VTIPVHSLVLKSVWPYFAKLTSSEPAKIKEGAWAMPYGSTWVFPLIKYCYGDLETMNFEE
ATGALILAQRYDLPELSQIVQRHILGSPLNIETCLLGWKRAFEGNNSVVRMYCARHYYQN
MNQLAISNTYAELTKEELIQLGIDAGESLKQIERK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG