YALI0F23221g

Overview

Description similar to uniprot|P16120 Saccharomyces cerevisiae YCR053w THR4 Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine
Locus type CDS
Locus tag YALI0F23221g

Location

Species Yarrowia lipolytica Positions 3045067..3046747
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1681 (nuc.)
Previous locus YALI0F23199g Next locus YALI0F23243g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23221g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23221gYALI0F23221g_mRNA-001YALI0F23221g_CDS-001

Nucleotide sequence

 

>YALI0F23221g
ATGACCACCTACTTTTCCACGCGATCATCCAATGAGCCCATTTCCTTCGAGGCTGCCGTC
ATGAAGGGTCTGGCCCCCGATGGAGGTCTTTACATTCCCACCTCCATCCCCAAGCTGCCC
TCCGACTTCCTCACCAAGTGGGCCGATCTGAGCTTTGCCGAGTTGGCCTTCGAGATTCTC
AGTCTGTACATTCCCGAGTCTGAGATCTCGCGAGCCGACCTGAAGGAGCTTGTCACCCGG
TCCTACTCTACTTTCCGATCCGACGAGGTCACCCCCGTGGTTGAGCTCAGCAAGGAGAAG
CAGCTTTATCTGCTGGAGCTATTCCACGGCCCCACCTACGCCTTCAAGGACGTGGCTCTG
CAGTTTGTTGGCAACCTGTTTGAGTACTTCCTGACCCGAAAGAACGTTGGCAAGGAGGGC
ACCGACCGAGATACTCTTACCGTCGTGGGAGCCACCTCTGGTGACACCGGCTCCGCCGCC
ATCTACGGTCTGCGAGGCAAGAAGGACGTTTCTGTCTTCATTCTGTACCCCACCGGCCGA
GTCTCCCCCATCCAGGAGGACCAGATGACGACTGTCTCTGACGCCAACGTGCACACTATC
TCCGTTGCTGGTACCTTTGACGACTGCCAGGACATTGTTAAACAGGTCTTTGGTGATGCC
GAGTTTAACGCCAAGCACCACGTCGGTGCCGTCAACTCTATCAACTGGGCCCGAATCCTC
GCCCAGATCACCTACTACTTCCACTCCTTCTTCCAGGTCCAGAAGAAGTTCGGCACCTCC
TCCGCCATCAAGTACTCTGTCCCCACTGGTAACTTTGGAGACATTCTCGCTGGCTTTTAC
GCCCGACGAATGGGTCTGCCCATCCAGGAGCTCACCATCGCCACTAACTCCAACGACATT
CTCGACCGATTCCTCAAGACTGGCTCCTACTCGAAATCCGACGGAGCTTCTGCCGAGGTC
CATGCCACCCTTTCCCCCGCCATGGACATCCTCGTCTCCTCCAACTTTGAGCGATTCCTT
TGGTACGTTGCCCGAGAGAACGTTGCTTCTTCGGACGCTGAGGCTGGAGCCACCCTCAAC
AAGTGGATGCAGTCTCTCAAGACCGACGGTGTCATCACTGTCGACGCCAAGGTCCTTGGA
GCCGCAAAGTCCGAGTTTTCCTCCGAGCGAGTCTCCGACGAGCAGACTCTCGAGACCATT
AAGGATGTGTTTACCAACATTTCCAAGGGCTATATTTTGGACCCCCACTCCTCTGTTGGT
GTCACTGCCGCTCTGCGAAAGCTTGAGGGAACCGACTCCGTGTACATTGCTCTGTCAACC
GCTCACCCCGCCAAGTTCTCTGACGCCGTCGACCAGGCCCTCAAGGGTCTCGAGGGCTAC
AACTTTGAGCGAGATGTTCTCCCTCAGGAGTTCAAGGACTTTGCTAACAAGGACAAGAAG
AAGCTGTTCAGCAAGGCCGACGTCAAGGAGGTCGAAAGCATCATTGAGGAGGAGCTGGCC
AAGGAGAAGAAGCAGTAAATTGATTTGAAAGAGGGAAGCAACTTTGATACTTGTTTAGCA
GGGGCCTCGGTACGTCTGAAAGTATGCGCCACTAAAACACTGAAAGGTATAGGCTATGAA
ACAGGCATGTTAACTGTTTTGTGCATGCAAATAGATAAAAATTAATATTGGTTACAACAT
G

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23221g_CDS-001

Protein length: 506 aa.
Product: Threonine synthase, putative

>YALI0F23221g_CDS-001 MTTYFSTRSSNEPISFEAAVMKGLAPDGGLYIPTSIPKLPSDFLTKWADLSFAELAFEIL
SLYIPESEISRADLKELVTRSYSTFRSDEVTPVVELSKEKQLYLLELFHGPTYAFKDVAL
QFVGNLFEYFLTRKNVGKEGTDRDTLTVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGR
VSPIQEDQMTTVSDANVHTISVAGTFDDCQDIVKQVFGDAEFNAKHHVGAVNSINWARIL
AQITYYFHSFFQVQKKFGTSSAIKYSVPTGNFGDILAGFYARRMGLPIQELTIATNSNDI
LDRFLKTGSYSKSDGASAEVHATLSPAMDILVSSNFERFLWYVARENVASSDAEAGATLN
KWMQSLKTDGVITVDAKVLGAAKSEFSSERVSDEQTLETIKDVFTNISKGYILDPHSSVG
VTAALRKLEGTDSVYIALSTAHPAKFSDAVDQALKGLEGYNFERDVLPQEFKDFANKDKK
KLFSKADVKEVESIIEEELAKEKKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG