YALI0F22561g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F22561g

Location

Species Yarrowia lipolytica Positions 2981074..2981712
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 639 (nuc.)
Previous locus YALI0F22539g Next locus YALI0F22583g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22561g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22561gYALI0F22561g_mRNA-001YALI0F22561g_CDS-001

Nucleotide sequence

 

>YALI0F22561g
ATGTGTCCGTGTCCATGTTACATTCATCAAATGGTGCTGTTCCAAAAAACACGACGGCTG
GTCAAAAAGGTACACAATGCTATGCACTACCGAGAGAGCAGCGTGAGCGACGACGAATTT
GAATGCTTGGCTAGTCCAGTGGGCAGCTTTGAGGTCAAGAGTGTGACACGAGATACTCCC
TCCAACGATTACTACTGCAAAGACATGGTTAAATGCATTCCTCCTAGCTATGATCTCGAC
CACCCCAACTACACCAATCTGAACACTCCGCCATTGACTCCAACGACTCCATCCTACACT
CTTGCTCTGACAACACACACCGTCTCAAGCACTTCTTTACCGTCCATTGCGCCGCTGGTT
TCGTCGCAAGTTGTGGACGACAACTTCCCCGTGCAGGATTACACCAAGTGGGAGGCTCAA
TATGGCCACTCTGTCTGTCAGGACTGTCTGGTGTGTACCAGACCCTTTTGCCGGGGCGAC
CAGATCCGAGAGCTGCCCTGTTCAAGCACCCTTCCCCATATTTTCCACTCCAGTTGTCTG
TTTGACTGGCTTACACAAAGCCATCTGAGTTGCCCTACTTGCGACAGAGAGGTCTTGTAG
TATTTATTTATAATGCATTAATTACAGTACGAATACTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22561g_CDS-001

Protein length: 200 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F22561g_CDS-001 MCPCPCYIHQMVLFQKTRRLVKKVHNAMHYRESSVSDDEFECLASPVGSFEVKSVTRDTP
SNDYYCKDMVKCIPPSYDLDHPNYTNLNTPPLTPTTPSYTLALTTHTVSSTSLPSIAPLV
SSQVVDDNFPVQDYTKWEAQYGHSVCQDCLVCTRPFCRGDQIRELPCSSTLPHIFHSSCL
FDWLTQSHLSCPTCDREVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG