YALI0F22583g

Overview

Description some similarities with uniprot|E5A9S8 Leptosphaeria maculans hypothetical protein LEMA_P015490.1
Locus type CDS
Locus tag YALI0F22583g

Location

Species Yarrowia lipolytica Positions 2982590..2984163
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1574 (nuc.)
Previous locus YALI0F22561g Next locus YALI0F22605g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22583g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22583gYALI0F22583g_mRNA-001YALI0F22583g_CDS-001

Nucleotide sequence

 

>YALI0F22583g
ATGTCGCTGGACAGGTCGAAGTACTATGGCCATTGGGTTCCTCTCAGTTGCTACGATATC
CAGCGACTAGATCGTAAAGCGGTCTCTCGTTCTGAGAGTAACACCCGGAAGAACTACGCG
TCACGTCTGATTCATTTCTACAAGACCCATCCCATTACTCACATTCGACTGACAGGCTCA
GTCATGTCTGTTGATGTGCGAACTATCAACAACGATATCCATGGCAAGCTGTCTGTGTCA
CTGGAGGTTGACGACGGGTCGGGAGAGACAGTAGTGGCATCATTCCTTTGGAGAGGAGAT
ATGGGAAGTGTTAAAGCCCATTATGACAAGCTGTTACACAAGACTGTGTCTGTTCGAGGT
ACGCCTTTCACTCGCTTCTGGAATGAAGGCAAGGTTGTGTCGCTGGATCTGAAGAGTGTT
GATTTGCTCGATTTCGCAGGCGAGATGGAAGCGATAGACAACCGCATGTACACGTTGGAA
CAACTCAATCTGTCCCCAGCATTTGATTACACGCATGAACTTCCAGAGGAGGAGCAAGCT
GATGTCAAGTTTCTCGACTACGAGGTCATGAGTTTCAAGAACGCGGTGAGTTTCACCGAC
GTCGAGAAGGCTGTGATTGTTGAGGACAAGAATGGAGGAAAGGTGCAAGGAAAGGAGCAG
AAGGATAAGAAAGAAAAAGGAACTGGAGCCGAGCATAAAGGAGATACTGAAGAGTTGGGG
AGGAAGGATAACGAAAGAGAAAAGGATAAAGGGGCGATCGAAGAAGTGGCCGAGGTACAG
GACCACCCGCAATATCCCAACCTGGCACAGCTGTTTAGACTACCGAGTGCAGGCAAGGCC
CAGAAGACTGTGCAGCTACCAGACGAAGTAATTGTCATCGAGGAAGATGAAGATTCTCAG
GATATGGTGGATAAGACCAACCGTCATGGTGAATCTAACGGGCACTCTGAGATTGAACGC
CATACTGACCTGGCCGGAGTGATAGATGTCGAGGAGATCGATATTCTCGAACAAGAACTG
GATGAGCCAGTTACTGAACAAACTCCCGAGAAAACTTCTGTGAAATTCACTAGACAAGTC
GCTGGGCAATCTACAGAGAAATCTGAACAAACGGATCATAACAACAACTCCCTTGAAGCT
GTCACCATTGAGCCACCTGCAGACACTGGTGGACATGTGGAGGTTCTCTCTTCTGATTCA
GATATCCAGTTCGGTATTATGAACAAGTTCATTTTGGGAAAGTCGTCATCCCCTGATGGA
GGAGCTTCGACTTCCTCTTCCCCTATTGTTGTAGAGTTTAGCAGTTCAAACTCCAAGGAT
GGCTCGCAAAGCCAGGAATTCCAGATCATAAAGAAGCTACCAAAGAGCGCAAAGAAACCA
TCATCCGAGCCATCTACACATCCAACACCTCAGAAGACGAAAATCACTCCTACGAAGTCT
TGTCCCAAGTTCAAGTATACCGATTTTCCAGCATTGAAACGTCGAAGATACACCCCTGAT
ACGGCGTGAGGCATGCGGTGCACAGTCGCATTCATCAACATTTTGCATAGCTATAATTTA
TTCAATCCAATACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22583g_CDS-001

Protein length: 503 aa.
Product: Conserved hypothetical protein

>YALI0F22583g_CDS-001 MSLDRSKYYGHWVPLSCYDIQRLDRKAVSRSESNTRKNYASRLIHFYKTHPITHIRLTGS
VMSVDVRTINNDIHGKLSVSLEVDDGSGETVVASFLWRGDMGSVKAHYDKLLHKTVSVRG
TPFTRFWNEGKVVSLDLKSVDLLDFAGEMEAIDNRMYTLEQLNLSPAFDYTHELPEEEQA
DVKFLDYEVMSFKNAVSFTDVEKAVIVEDKNGGKVQGKEQKDKKEKGTGAEHKGDTEELG
RKDNEREKDKGAIEEVAEVQDHPQYPNLAQLFRLPSAGKAQKTVQLPDEVIVIEEDEDSQ
DMVDKTNRHGESNGHSEIERHTDLAGVIDVEEIDILEQELDEPVTEQTPEKTSVKFTRQV
AGQSTEKSEQTDHNNNSLEAVTIEPPADTGGHVEVLSSDSDIQFGIMNKFILGKSSSPDG
GASTSSSPIVVEFSSSNSKDGSQSQEFQIIKKLPKSAKKPSSEPSTHPTPQKTKITPTKS
CPKFKYTDFPALKRRRYTPDTA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG