YALI0F22209g

Overview

Description some similarities with uniprot|P40011 Saccharomyces cerevisiae YER010c
Locus type CDS
Locus tag YALI0F22209g

Location

Species Yarrowia lipolytica Positions 2943754..2944752
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 999 (nuc.)
Previous locus YALI0F22187g Next locus YALI0F22231g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22209g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22209gYALI0F22209g_mRNA-001YALI0F22209g_CDS-001

Nucleotide sequence

 

>YALI0F22209g
ATGTTCGTGCCTCGGTTTGGAATCGTGAAGAACGTCGCACTCAGAAACATCGTCATCACC
ACACGAATAGGCAAGACGTTCCACTCATCCACCATGTCCGAGTACCCCTACATTTCTGAG
CCGCAGACACCTGAGCTGCCCTCCTACCACTCCAAAATCCAGGGCATTGCCAACAAGTTC
CGAGAAGCCGGATGGACTGCCTGTGACGCAGCTGACGCTCTTGTCAAGCACGGCGACGAG
TCTGGAGGATACCTTCCCGGTCTAATTCAGCAGTCTTTCAACTCCAAGACTCCTGTGACC
GTTGGTCCTGCTTATACCGTCGAGTACGCCCCTCTGGATGACCCTCGACCCGCTGTTAAG
GCTGGATACATTGACGATGCCCCCAAGGGCGCTGTCATAGTCATTACCACTTCTCCTTCT
GTCCAATTGACTGCTGCTCCCTTCACTCGAATCTCTAACGCACTTTATGGAGGTCTGATG
AGCACTCGAGCCAATTACCTCAAGTGTGCTGGAACTGTGGTCTTTGGAAAGATTCGGGAC
AAGAAGGAACATGTCGATCTCGATTACCCCGTGCACTCTTATGGTCTGGGAACCACTGCC
CCCGGTTCTGCTGTCAAGGTTGTTGCTGTGGGCGAGCCCGTGGAGATCCAAGTTGCTGGT
CAGGCTGGAAAAGATGATAAGGCTGAGACCCGACGAATTGCCGCCGGCGATCTTGTTATT
GCTGACGAGAACGGCGTCGTTGTGATTCCCGAAGCTGACGCCCAGAAGGTGTCTCTCTAC
ATTCCTGCTCGAGTCAAGGCCGACACTCTTGTTGCCAGCGACATCAAGGAGGGAGTCCGT
GCCCAAGAGGCCCAGAAGGAGCGACGACGACTCATGTACACCCCTCTGAACGATGAGGAT
GAGTGATATGAGGATGTTGAGGTCGAGAAGGGCTTCTAGACTTCCTGGCCTCAGCAATGA
CTTATGACTATAGATGATATAGAGAAGATTATGACGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22209g_CDS-001

Protein length: 302 aa.
Product: Conserved hypothetical protein

>YALI0F22209g_CDS-001 MFVPRFGIVKNVALRNIVITTRIGKTFHSSTMSEYPYISEPQTPELPSYHSKIQGIANKF
REAGWTACDAADALVKHGDESGGYLPGLIQQSFNSKTPVTVGPAYTVEYAPLDDPRPAVK
AGYIDDAPKGAVIVITTSPSVQLTAAPFTRISNALYGGLMSTRANYLKCAGTVVFGKIRD
KKEHVDLDYPVHSYGLGTTAPGSAVKVVAVGEPVEIQVAGQAGKDDKAETRRIAAGDLVI
ADENGVVVIPEADAQKVSLYIPARVKADTLVASDIKEGVRAQEAQKERRRLMYTPLNDED
E*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG