YALI0F22187g

Overview

Description some similarities with uniprot|Q7S1U2 Neurospora crassa NCU09057.1 hypothetical protein
Locus type CDS
Locus tag YALI0F22187g

Location

Species Yarrowia lipolytica Positions 2940813..2941637
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 825 (nuc.)
Previous locus YALI0F22165g Next locus YALI0F22209g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22187g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22187gYALI0F22187g_mRNA-001YALI0F22187g_CDS-001

Nucleotide sequence

 

>YALI0F22187g
ATGCTTCGAACCACTCTAAGAACTTCTCGAGTTCTGTCTGCCCGACAGTTCACCGTTGCC
TCTCGTCTTCAGCAGGATCCTCTCAAGAAGGCTGCCAGCGATGCTTACGACACTGTCAAC
AAGGCTGCTCTGAAGGGAATTGATCTGGCTCAGGATGCCGCTGATGCTACCAAGAAGGCT
GCTGACCAGGCCAAGTCCAAGCTTGATTCTAACCAACTCGACGGGAAGATTAAGGAGGTT
TGGGAGTCTGCCAAGGGCAAGGCTCAGGATCTTCAGTCTGAGGCTGAGGACAAGGCCCAC
GATCTCAAGGGCAAGGTCGATAACCAGTCTGGAGGACTCAAGGGAGAGGCCAAGGAGGCC
TGGGGTGATGCCAAGGGCAAGGTCGAAGAACTCAAGGGCCAGGCCCAGGGTAAGGCTCAG
GAGCTCAAGGGAGAAGCTAAGGACGCCATCAACAGCGGTAACACTGGTGATCTGAAGGGC
AAGGCCAAGGAAGCTTGGGGAGATGCCAAGGGTAAGGCCCACGAGGTTGCTGGCGAGGCT
AAGGGCAAGGCCCACGAGGTTGCTGGAGACGCCAAGAATGCTGCCAACAGCGGAAACGCT
GGAGAGCTCCAGGGTAAGGCTAAGGAGGCCTGGGGTGAGGCAAAGGGTGATGCCAAGGAT
CTTGCCGGTAAGGCCAAGGGTAAGGCCGAGGAGCTCAAGGGCGACATTAAGGGTAAGGCA
AAGGAGCATCTTTAGATGTCATTCCTTTCAAAAAGATGACATCTGAATAGGATTTCTAGC
AGTTATATATTATAGGAATGATGGATATTGAATTAGAAAAGTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22187g_CDS-001

Protein length: 245 aa.
Product: Conserved hypothetical protein

>YALI0F22187g_CDS-001 MLRTTLRTSRVLSARQFTVASRLQQDPLKKAASDAYDTVNKAALKGIDLAQDAADATKKA
ADQAKSKLDSNQLDGKIKEVWESAKGKAQDLQSEAEDKAHDLKGKVDNQSGGLKGEAKEA
WGDAKGKVEELKGQAQGKAQELKGEAKDAINSGNTGDLKGKAKEAWGDAKGKAHEVAGEA
KGKAHEVAGDAKNAANSGNAGELQGKAKEAWGEAKGDAKDLAGKAKGKAEELKGDIKGKA
KEHL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG