YALI0F21989g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F21989g

Location

Species Yarrowia lipolytica Positions 2913594..2914163
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 570 (nuc.)
Previous locus YALI0F21967g Next locus YALI0F22011g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21989g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21989gYALI0F21989g_mRNA-001YALI0F21989g_CDS-001

Nucleotide sequence

 

>YALI0F21989g
ATGTTCCTCTCAGTCCAGTCTGCCCATCCAGATTGCTGTCTTCAATTCCTGTTATACTGG
AAAGACAGCTGCGGTCAGCATGCCCTTCGACGCACACACAGCCTAGACAGGTGTGCGCTC
TATCTCTCAGGTCCTTGTATCCAAGGTAACGTCAATCTTCCTCAGCGCCACTCCAAAAAG
AGTATTCAGATGACTATGAGCAGCACTACCGCAGTCAAGACCACTGAAGTTCCCCATTTC
GCCCGCCTACCAGGATACGGCTTTCTGGAGAAAGTGGTGGTCCATATCATCCGCAACTTT
CTAGTTCACCTGTGTTTAAATATGGAACTCGTTCATATTGTGACAGAGGGAAGCCTTCAG
AAGATAGATGAATTATTCCCAACTTACAGAAAATCAGTTGCCATGACACGCTCGCTGCCC
TCTGCCCAGATGACGAAGCTTCGAAGAGCTCGACCACTCGGATGTCCGCCACCAACTCAC
CTATTATCGATATTCAAGACCAGGCGAAGAGATGCATTGACAGACTTACCTGGTATGAGT
TTTCCAAGGGGGGTTTTGACTGCCTTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21989g_CDS-001

Protein length: 190 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F21989g_CDS-001 MFLSVQSAHPDCCLQFLLYWKDSCGQHALRRTHSLDRCALYLSGPCIQGNVNLPQRHSKK
SIQMTMSSTTAVKTTEVPHFARLPGYGFLEKVVVHIIRNFLVHLCLNMELVHIVTEGSLQ
KIDELFPTYRKSVAMTRSLPSAQMTKLRRARPLGCPPPTHLLSIFKTRRRDALTDLPGMS
FPRGVLTAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG