YALI0F21945g

Overview

Description similar to uniprot|P24279 Saccharomyces cerevisiae YEL032w MCM3 replication initiation protein
Locus type CDS
Locus tag YALI0F21945g

Location

Species Yarrowia lipolytica Positions 2905237..2907691
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2455 (nuc.)
Previous locus YALI0F21923g Next locus YALI0F21967g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21945g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21945gYALI0F21945g_mRNA-001YALI0F21945g_CDS-001

Nucleotide sequence

 

>YALI0F21945g
ATGGATCTCGAAGACTCGCTTTTCCAGGACCGTTCCAACCTCTTTCTGGACCTGCTGGAC
TCTCCCACTCTGTCGCACAGAGAAAACATTCTGCAAATGCTCAACCGCAATGAGAAACGG
TACTGTGTTTCGCTGGACGAAATCCGAGACTTTGACCGACCCTTTTGGCAAGGATTGATT
GACCACCCTACACCTTACTTGGAGGCCATGGACAATGCTCTCAAACAGATTGTGCATGGT
GTTCGAGACGCTCGTCACATGTTTCCCGAGCACGAGCACTTCTATGTAGGCCTCACGGGC
TCTCTCGGAAACCATATGCGAAACCCCCGAACTATCGATGCGAAGCTGTTGGGTCAACTA
GTTGGAGTGGAAGGTATTGTTGTCCGAACCTCTCTCGTGCGACCCAAAGTGCTGCGATCA
GTTCATTACTGTCCTGCCACCGGTCTAACCGAGTCCAAAACATACAAAGATCAGACTATG
GGTGAAGGAACAGTCACCCAGGCAGCTGTTTACCCTACAGCTGACAACGACGGCAACCCA
CTTATCACAGAGTACGGCATGTGTACTTATATGGACCATCAGACCATCAGTATTCAAGAA
ATGCCCGAAAAGGCACCAGCAGGACAGCTTCCCACCAGTTTGGAGATTGTTCTTGATGAC
GATCTGGCCGACAAGGTGAAACCTGGAGACCGAATTCAGATCATCGGAGTCTACAGAACC
CATGGAGGAGGAAATGGAAGCTCGCGGTTCCGAGCTTACGTTCTGGGAAACAATGTGGTG
ATTCTGAACGCCAAAAGTCACGTTGTCGAGGGAGTCTCGGATGAAGAGGTACGGCAAATC
AACCTCATCAGTAAGCGAGATGATGCCTTTGACATTCTGAGTCGATCTCTGGCTCCTTCT
ATTTTCGGATTCGAGTACATCAAGCAGGCTGTTTTGCTGATGTTGCTTGGTGGAGCCGAA
AAGAACCTGGAGAACGGTACCCATATTCGAGGAGACATTAACATTCTCATGGTTGGAGAC
CCCTCCACTGCAAAGTCTCAGATGCTGCGATTTGTGCTCAACTCGGCCAATCTCGCAATT
GCTACTACTGGTCGGGGTTCGTCTGGTGTCGGTCTTACTGCTGCAGTGACTATGGATACT
GACACTGGAGAGCGACGTTTGGAGGCTGGAGCGATGGTTCTGGCCGACCGAGGAGTGGTC
TGTATTGATGAGTTTGACAAGATGAGTGACACTGATCGAGTTGCTATCCACGAAGTCATG
GAACAGCAGACTGTCACTATTGCCAAGGCTGGTATTCACACCACTCTTAATGCCCGATGC
AGTGTCATCGCGGCTGCCAACCCTGTGTTTGGACAGTATGATGTCACCAAGCCTCCTCAC
AAGAACATTGCACTGCCAGACTCGCTTCTGTCGCGTTTCGATCTACTCTTTATCGTCACT
GACGAAACAAACGACGAGAAGGATCGACGAATCGCCGATCACGTGATCAAAATGCACAGA
TACGTGAAACCCGGCACGGAAATCGGAGCCGTCACACGTGACCAGCCTCCTCAGGTGCTT
GCCGTTGGAGAGCCAGTCAAGGACACTGCCGACGATCCCATGTGGGACATTGAAGAGCAG
GTACTTTCTGTCGGGTTTGTCAAAAAGTACATTCAGTACGCCAAGTCACGTGTGAGTCCC
GTTCTTTCACGTGATGCCTCCAACCTCATTGTCGACACGTACACTTCTCTTCGAAACGAC
GACACTTCTCAGCGGACAGCTCCCATCACTGCTCGAACACTCGAGACGCTCATTCGTCTC
TCCACTGCACATGCCAAGATCCGTTTGTCGTCACGTGTGGACCTGGAGGACGCTGAGGTG
GCACGTGACGTGCTTAGATACGCGCTGTTCAAGGATGTGCCTGTCGAGTCTCGTGTAAAG
CGACGACGACGAGCCGAGGCTGCTGTTGGGCAGGAGGTCAGTGACGTCGAGGATAATCTG
GAGCACTTGGAGCTCTCTGATGACGATGGAGATAACAACGTCTACAACTCGCAAGCGTCT
ACAGCTCGTCAGCGGTCGTTGGCAGCTCTTCGGGCGGACTCTACGTTCGATGAAATGTCT
GATTTCGTTGTTCCTTCTTCTCAGCTTGTGTCTGAGATCGATATGGAGGACTCTGTGCTC
AGTTCTCAGCCTCGAGCACGACAAGGCCTGTCGACTTCGCGCCTGGACTTTTTCACCCGC
GAGTTCTCCAACGTGCTACGAGCATCCAAGGACTTTGAGAACGGAGGATCCATGCACAGA
GACGCTGTTCTTGAGGCCATCAACCGCTCTATCCCTGAGGAGGACAAGTTTGCCGAGGAA
GAGGGATACGCAGTTCTTCAGCGACTCAGTGACGATGGTAAGATCATGTTGACCGACGAC
GGCGAGGTTTATTCTATTTAAGTGTTTAATTAATTGTTATAGAGATGTTGATCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21945g_CDS-001

Protein length: 807 aa.
Product: Protein involved in DNA replication, putative

>YALI0F21945g_CDS-001 MDLEDSLFQDRSNLFLDLLDSPTLSHRENILQMLNRNEKRYCVSLDEIRDFDRPFWQGLI
DHPTPYLEAMDNALKQIVHGVRDARHMFPEHEHFYVGLTGSLGNHMRNPRTIDAKLLGQL
VGVEGIVVRTSLVRPKVLRSVHYCPATGLTESKTYKDQTMGEGTVTQAAVYPTADNDGNP
LITEYGMCTYMDHQTISIQEMPEKAPAGQLPTSLEIVLDDDLADKVKPGDRIQIIGVYRT
HGGGNGSSRFRAYVLGNNVVILNAKSHVVEGVSDEEVRQINLISKRDDAFDILSRSLAPS
IFGFEYIKQAVLLMLLGGAEKNLENGTHIRGDINILMVGDPSTAKSQMLRFVLNSANLAI
ATTGRGSSGVGLTAAVTMDTDTGERRLEAGAMVLADRGVVCIDEFDKMSDTDRVAIHEVM
EQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVTKPPHKNIALPDSLLSRFDLLFIVT
DETNDEKDRRIADHVIKMHRYVKPGTEIGAVTRDQPPQVLAVGEPVKDTADDPMWDIEEQ
VLSVGFVKKYIQYAKSRVSPVLSRDASNLIVDTYTSLRNDDTSQRTAPITARTLETLIRL
STAHAKIRLSSRVDLEDAEVARDVLRYALFKDVPVESRVKRRRRAEAAVGQEVSDVEDNL
EHLELSDDDGDNNVYNSQASTARQRSLAALRADSTFDEMSDFVVPSSQLVSEIDMEDSVL
SSQPRARQGLSTSRLDFFTREFSNVLRASKDFENGGSMHRDAVLEAINRSIPEEDKFAEE
EGYAVLQRLSDDGKIMLTDDGEVYSI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG