YALI0F21813g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F21813g

Location

Species Yarrowia lipolytica Positions 2886101..2888300
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2200 (nuc.)
Previous locus YALI0F21791g Next locus YALI0F21835g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21813g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21813gYALI0F21813g_mRNA-001YALI0F21813g_CDS-001

Nucleotide sequence

 

>YALI0F21813g
AACACTCAACATCCTTGTGCCACCCTCACATTTGCCATGGATATAGCGCAAATACGGCAA
GCAGCGCTCAACTCGCTGTACGCCCACAAAGACCATCTAGACACGCTGCGCAAAAACACA
GCAAATTCAACCCATCCACCCGCAGGCGACGAAATCCGGGTTGTGGATGTGAAGCAGTAT
ACTCAACCAACAACACAAGGTGTCTCGGCCCACCCCGTACCACAAGGTGTGTCGTTGCCA
ACGCCACCCGCACTGCCGATAGTGACCACGCAACCGGCGTTATCGCCAATGCCTCCGCTC
ACCCGGCAGAAGCCTTCGCCGTACCCTCGGCAACATGCGCCGCCACCGCCAGCCACCTCC
AAACCCACGTTTCTTGGCTTACTGGGTGGTCACCCCGTCTACCAGTCTGTTTTCGACCTT
CGTCGTTTGGGACTGCGGTTCGACGAGATCCTGCAACAGAGCGGATGCAGTGAGGAGTTT
CTGCGGCATATCTTCAAGCAGCTGGGATATAGCATCGAGTCGGTGGTCCAAACACCCATG
CCCCCTATCCCGACCCCTGTGGCCGCGGTTCAACAGACACAGATACAATCACAATCATCA
CGCACACAACCGGTGATGACCTTCGAGCAGTTTCGCAAGACACGATCAGAGCTCAACACA
CCCACCCCGCAGACTCCGCCCATTGGTGCTGCTGCCTTCAATCCTGCGTACGTCGTTCCC
GTTCGCTCCATCCCTAGGTTCGGAGAGAAGTCTCGTCGTCAGAAACGACTTTGCATTGAG
ATTAGTGACAGCGAAAGTGACAGCGCAAGCGAAGGTGTTGTGTCAAAGAAGCATAAGGAC
ATGTCTCTGGAAGAGACGCGGCTAGAGATTGCACGAATCCGGGCCTTGATTGCCCAGCAG
AACGCGTCGTCCAGAAACGGCACTCCCAGCCATGAGGATAGTGAGGCCAGCGAGACCAAC
GAGACTGCTGCCATCGTGGAGAAGAGCCCTCTTGTTGAAGAGGCTGCTGGAAAACTCGAA
TATGTCGTTCAAATCGCAGCAGCTGCCCCCAAGAGCGGTTCTCCTGCCTCGCCACCTCTC
CCTGTGACGCCTGCTATTTCCCCAGAGGTCCAGGCGTACCTCAACTCGAAACACATTGCA
TTAGAATCGCTGAGCGCGGTTCAACTGGACAAGATTGTTCAGATCGTCAAACTCAAGACC
TTGTTGCAGGGCGAGGAGGATGCATTCACGACAAGTCTGAAGAGCGCGACACAGCCACAT
TCGATACCCCAACCTGATATACCACCCCCTGCCACCCGGCAACCTAACCAAAGTGACACA
GAAGGTATCGATGCTAGTGATCGAGCACCTTCCTCCCACAGTCATCAACAGCAGAGCCAG
GCTGCTCATGTAGTAAGTATGGCTAACACAGAAGAACAAATTGGAGTGACGAATGAGCTG
AGTGGGGTTGGCAAACGAGCTTGGCGAGGACACGGGAAAAATTTCACGGGCGGAAGCGGA
ATGGCAAAGAGTTGCATTCGGTTTATTTTCTTTCTTTGGTGCATGCTTTTTTTTGCGTGG
TGCACCGCAATATTTCGTTTTTCGATCCTCGCGTCATTTTTCTCTTCTACCTCGACAAGA
TCTATGTTGCTTTTCTATTTTTCCCAGCACTAGTCGTTCATTTCATTTCCTACTAACACC
AAGCAAAAGGAGCGGGAGATCCAAGACTCGTCTTACCGGTCTCCCTTGGCGGCTTTCCGT
AGCCACAAATTCGGTCCTCTGAGCACACTCAGTGCTCAGCGGCCGGTTCATGTAGATAGC
GAGTCCTCCGACTCTTTGGCTGACGCCGACTCTGATACCATTTCTTTGGCCGAGTTCAAG
CCGTCCGAGCTTCCCTTGTGTCCGTACGAGCTCCAGGGCGTGTGCAACGACTCCAAGTGT
GAGCAGTACGCGCACTGGCGTGATCTGCGGCTCAGCAAGAACGAGCGGATTCTCGAAATC
ATGCGGGCCTTTGTAGGCAACTCGCCCGAGGAGCAGAAGCAGTACAGGAACGAGCTCAAC
GTTCGCCTGAAACAGCTCAAGGGCGCTGATTTCGACACCATTCTCCCTGCGCTGACGCAG
TTCCGCAACCAGCATATTACTGACGGCCACTTCCTTGACTGGTATGCCTTCAACCGTGTA
GACGTCCAAAACTAACTTAATCTAATGCATTTATAGAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21813g_CDS-001

Protein length: 616 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F21813g_CDS-001 MDIAQIRQAALNSLYAHKDHLDTLRKNTANSTHPPAGDEIRVVDVKQYTQPTTQGVSAHP
VPQGVSLPTPPALPIVTTQPALSPMPPLTRQKPSPYPRQHAPPPPATSKPTFLGLLGGHP
VYQSVFDLRRLGLRFDEILQQSGCSEEFLRHIFKQLGYSIESVVQTPMPPIPTPVAAVQQ
TQIQSQSSRTQPVMTFEQFRKTRSELNTPTPQTPPIGAAAFNPAYVVPVRSIPRFGEKSR
RQKRLCIEISDSESDSASEGVVSKKHKDMSLEETRLEIARIRALIAQQNASSRNGTPSHE
DSEASETNETAAIVEKSPLVEEAAGKLEYVVQIAAAAPKSGSPASPPLPVTPAISPEVQA
YLNSKHIALESLSAVQLDKIVQIVKLKTLLQGEEDAFTTSLKSATQPHSIPQPDIPPPAT
RQPNQSDTEGIDASDRAPSSHSHQQQSQAAHVQKEREIQDSSYRSPLAAFRSHKFGPLST
LSAQRPVHVDSESSDSLADADSDTISLAEFKPSELPLCPYELQGVCNDSKCEQYAHWRDL
RLSKNERILEIMRAFVGNSPEEQKQYRNELNVRLKQLKGADFDTILPALTQFRNQHITDG
HFLDWYAFNRVDVQN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG