YALI0F21450g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F21450g

Location

Species Yarrowia lipolytica Positions 2845222..2849614
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 4393 (nuc.)
Previous locus YALI0F21428g Next locus YALI0F21483g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21450g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21450gYALI0F21450g_mRNA-001YALI0F21450g_CDS-001

Nucleotide sequence

 

>YALI0F21450g
ATGCGGTGGTTTGTGGTTCTCTTGCTAACACTGGTTTCAGCTGGCCCGATACATTGGCAG
CGACAGCAGCTACAACCATACCGACACTCTTTCGACAACCTCGATCTCTACTCACAAGAC
CACTTTGACACCGAAGTGGCTCTCGACACAGACCCCGTCTTGCTGGACGAACGACAGACA
CAATGCATCGACCTGTCGGTGGACTTTTGCAGAGAGAGCTGCCAGAGCATCATCACAGAG
GTAGCATCATGTTTGCCACTGCTTATGTCCCGATGTCTGTGTCCCAAGATTGAAACGTCG
CTGCGGAACATTGCCATCTGTGTCGCATGCACCACCCGTTTCCCCATCATCTCGACGCTT
GGAAACCAGGTAGCCGGCTTTTTGCGTATCTGCAGCGCTGTCCAGCCCCCGCATTTGCAG
TTTTGCGACATTGAGGTACCCGAAGCCAGTGGCAGCTTTGCGCTCTCGGATCTCTCTGGT
GGTCTTACAGATTCCTTTACTGTATCTGTGGGTGGTACTCCCACCAGTCTGCCTAGTTTT
TCTGTAACAGACCCTTCTCTATCAGGGCCTAGTCTGACTTTTGATCCCAGCTTCAGTCTT
CCTAGCTTCAGCGGTCCCTCTTTTACAGGACCCTCTTCCACAGAGCCTAGCGTTACTGAG
CCCAGTTTGACACTGCCCAGTTTCACCTCAGTGTCTGCTCCCTCGTTCACAGACCCCTCA
CTCAGCTCTTTCAGTCTGCCCGACGTCACTTTGACCGGTCCCCCCTTCACTAGACCGGAA
GTGACCCTGTCTAGTGGAAACATCTCGAGATCTACCAACCAGGTGTCTACCGCTGCACCC
TCGCATTGTGCCTCGAGCAGAGATGCTTGTATTGCAGCCTGTGCATCTGTGATCACTAGC
ATGCAGCAATGCAACACTCTGTCTCTTCAAAAGTGCCTTTGTGATGCGATTGTCGACTCT
GTCCCGGACGTCAACAACTGTATCTTCTGCAAGATGGTGTTCCCCGACATCGGCACTGCT
ATCCCCAATTGGCAGATCACGGGCATGCTCCAGTGTCCAGGTGTTAGTAGGGCAGTTTGT
GGCACTGTCTTGCCTACCAGTGTTTCGCAGACAAGCCTTTCTACTTCATCTTCGACTTCG
TTGGTTGCGTCTTCTTCTGACGCTTCTGTGTCCGGATCTTCTGCGTCCTTTCACACCTCT
TCCCTTACAATTTCAGTTTCTTCATCTCAGATCAGCTCCACTGTTAACAGCACCTCTGCC
GTCTCCAGCACTGCTTTTGTGTCCTCTGACAGCACCACTGAGTCGTCGGTATTCGAATCT
TCATCTTCTTCGCCTTCGTCTACTGTTGCTGTCAATAGTAGTTCTGTTCCTGTAACTACC
TCCTCTTCTCATTTCTCGAGTGCAGTGCCTTCCAGTCACAGCTCAGCTATTACCTCTTCG
ACTGTCGATACTACAGCCATCAAGTCTTCGTCTGATGGCTCTGGTTCGATAGTTTCTTCA
GCTTCTGTTTCTTCTTCTAATGCCACATCTGGTATTTTTCCTTCGGACATCACCTCTTCT
CAGGTGTCTAACTCTGGTTCAGTGTCCAGCAGCTCCGTCCCTAGCAGCTCGATATCGAGC
TCTAGTACCGATTCCAGTTCTGGCGTCCCCAGCACTGTCGACTCGTCCTCAACTTCCGGC
TTGCATTCTTCTGCCGTGACAACTGGACCGTCTTCATCTCTTTCTTCGACCACTTCTTTC
TCCAACTCGACGACTGACAGAACTACCGCTGTCATTCCTCCTGGCACCCGGTCTTCATTC
ACAGCTTCTCAGACTGATGTTTCTTCGGGGCTGACAGATAGCTCTTCTGCTTCTAAGACT
TCGGCCGTTGATTCATCAACTTCCGAGACCTCAGTCTCTAGTGCAGGAACGTCGGCTTCC
AGTACTGGAGAATCGTCAGCTAGAACTTCAAAGTCAACTGCTTCTGAAAGTCTCTCGACT
TCTGAAGTTTCATCTTCTGGCGTGACCTCTGAGTTGTCAGCTTCCTCAACTGTGACACCT
GATGTCTCCAGCTCCTCTCTGTCTTCTGATCCTAGCTCGTCTGTATCCTCTGATGCATCA
AGCTCGGTGTCTAACACAGCGTCGGCTAGACCAGTGTCTAGTTCAGATGTCTCCAGCACG
GGTTCCAGTTCTGCGGGCAGTTCGGACTCATCTGCATCTACATCGGGACCTTCGGCCACT
AATGTCGCATCCACTAGCTCAAGTGGCTCCGCTTCTGTGTCCTCTACAGACAGTAGTTCT
GCTTCTTCTGAGACCAACAGTGGCATATCAAGCAATGGCCCTTCAACCGCTTCCACAAAT
TCTGCCCCTGCTTCTAGTTCTGCTTCCTCAACTGGTCCCAACTCAGACTCAAGCCATGAT
CCCACTTCTGCCCCTGCTACATCCAGCGATCCAAGCAGTACTGCAAACAGTGTTTCTCAG
AGCTCGTCAAGTGCGTCCAGCTTGCCAGGTTCCAGCCTCTCGGCTCCGGACTCTTCAAGC
GTATCTAGTTCTTCGGCTTCAGCCAGTGCTTCTTCGCTAGAGTCCAGCTCAAGCAGTGTG
ACCAGCTCGATTGTATCCAGCTCTGCAGGATCCAGCAGCAGCGACGAGACTTATACAGGT
ACATCTGCCACTTCAGGCTCGTCAGCGACAGGTTCGTCTTCCTCTGTCTCATCTGACTCC
ACTTCTGCCTCTACTACTGACTCTTCTTCGTCCAGCAGTTCGGCAAGTGCTTCGTCTGGA
TCTTCTGATCCAGGCACTGCTTCTGAGAGCGCAGCTGCTTCAGCCTCTGCATCTCGGTCT
GCTTCTGCTTCTCCTTCAGCCTCTGTTTCTTCGGACACATCTTCTATCCCCCAGACTTCG
GCTAACCTGGTGCCTTCAACCCGGTCCATTCCCTACAATGGCACTGCTCTTCCTCCCGTG
GACAATGGTGTTAACCCCACTGCCAACCCCACAGACTCTCCTGTGTCGGCTCTCGGAGAT
GGTGAGTCCCCTGTCTCCGATGATAGCTCCCCTTCTCCTACTGGTGGTGCTGGAGATGTA
AACGGCAATCCTAGCGATGGATCTGGCGACGGCAGCACAAGCGGCAGTAATGGCGGCGAC
ACTAGCAACGGTTCTGGCAACGGTGACTCTAGTGATCCTAACAATAACGATCCTAACAAC
CCGAGTGATCCCAGCAACCCTGGTAACGATCCCAACGATCCCAACAGCCCCGACAGTCCC
AGTAATGACCCTAACAGCGCTGATCCTTTCAATGCCAATAATCCCAGTGATCCCAACAAT
CCATTAAACTCTAACGATCCTTCGAACAACTCGAATAGCCCCAATAGCTTGAACGATCCC
TCTAACGATCCCAGCGATCCGTCTTCTTCCGGTGCTGCTGGCGCCAATGGCGGTTCTCCT
GGTAATGGAGGCTCTTCTGGGGGCTCTGGCAACGGTGGGTCGGGTAACAGCGGCGCGGAG
GGACACGCTCCGGTCCCAGTCCGCCTGGATCTGGCTCTGGCTCGTCTGGCTCATCTGGAG
GTCATGGTGCTCCTGGATCTGGCAGTGGAGGTTCTAGCGGCGGTGGAAATGGTGGTGGGA
ATGGCGGTGACGGTGGAAATGGCGGTAACGGTGGAAATGGCGGTAGCGGTGGTGGAACCG
ATGGTGGATCGTCTGGTGGCGTCAGTGGTGGTTCTTCAGGAGGGTCCTCATCAGGATCGT
CTGGAGGATCTAGTGGATCTTCTGGATCTAGTGTATCTTCTGGATCTTCTGGATCTTCTG
GATCTTCTGGATCCTCTGGATCCTCTGGATCCTCTGGCTCTTCTGGCTCTTCTGGCTCTT
CTGGCTCCGGATCGTCAGGCTCATCGGGATCTTCTGGCTCTTCTGGCTCCTCTGGCTCTT
CTGGCTCCGGATCGTCAGGCTCATCGGGATCTTCAGGATCTTCTGGCTCATCAGGCTCCT
CTGACTCGGGAACTGGTTTTTCGGGCTCGAGCGGTGGTTTTACTTCTGGCGACAACAACA
ACTCGCCTAACAACTCGCCTGATGCTAATTCTCCTAACTCCCAAAACCCCGACTCTCCTG
ACAGACCCACTTCTACCACTCCTCACAACAACGACGGTTCGCCTGCTTCGCCTGTGCAGC
CTCCCATGGGCTCTCAAGGCACGATTCCCAATCTGCAGGGCAACCGAACCAACTCTACTC
GGGGCAACAAATCCGAGGGCAGTACCACGTACGGTGGCCTGGGCGGCAATGGTTCCATGT
TTGGTTCCGCCGCTACTGCGATTTCCATGAGTGTGGTTGTTCTGCTGCTGTTCTAGAAAG
ACTACAACAAAAACTCAAGACTGAAAGGTTTTATTTATTTATAGACTAATGCATGATATT
ATGGTAACTGCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21450g_CDS-001

Protein length: 1430 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F21450g_CDS-001 MRWFVVLLLTLVSAGPIHWQRQQLQPYRHSFDNLDLYSQDHFDTEVALDTDPVLLDERQT
QCIDLSVDFCRESCQSIITEVASCLPLLMSRCLCPKIETSLRNIAICVACTTRFPIISTL
GNQVAGFLRICSAVQPPHLQFCDIEVPEASGSFALSDLSGGLTDSFTVSVGGTPTSLPSF
SVTDPSLSGPSLTFDPSFSLPSFSGPSFTGPSSTEPSVTEPSLTLPSFTSVSAPSFTDPS
LSSFSLPDVTLTGPPFTRPEVTLSSGNISRSTNQVSTAAPSHCASSRDACIAACASVITS
MQQCNTLSLQKCLCDAIVDSVPDVNNCIFCKMVFPDIGTAIPNWQITGMLQCPGVSRAVC
GTVLPTSVSQTSLSTSSSTSLVASSSDASVSGSSASFHTSSLTISVSSSQISSTVNSTSA
VSSTAFVSSDSTTESSVFESSSSSPSSTVAVNSSSVPVTTSSSHFSSAVPSSHSSAITSS
TVDTTAIKSSSDGSGSIVSSASVSSSNATSGIFPSDITSSQVSNSGSVSSSSVPSSSISS
SSTDSSSGVPSTVDSSSTSGLHSSAVTTGPSSSLSSTTSFSNSTTDRTTAVIPPGTRSSF
TASQTDVSSGLTDSSSASKTSAVDSSTSETSVSSAGTSASSTGESSARTSKSTASESLST
SEVSSSGVTSELSASSTVTPDVSSSSLSSDPSSSVSSDASSSVSNTASARPVSSSDVSST
GSSSAGSSDSSASTSGPSATNVASTSSSGSASVSSTDSSSASSETNSGISSNGPSTASTN
SAPASSSASSTGPNSDSSHDPTSAPATSSDPSSTANSVSQSSSSASSLPGSSLSAPDSSS
VSSSSASASASSLESSSSSVTSSIVSSSAGSSSSDETYTGTSATSGSSATGSSSSVSSDS
TSASTTDSSSSSSSASASSGSSDPGTASESAAASASASRSASASPSASVSSDTSSIPQTS
ANLVPSTRSIPYNGTALPPVDNGVNPTANPTDSPVSALGDGESPVSDDSSPSPTGGAGDV
NGNPSDGSGDGSTSGSNGGDTSNGSGNGDSSDPNNNDPNNPSDPSNPGNDPNDPNSPDSP
SNDPNSADPFNANNPSDPNNPLNSNDPSNNSNSPNSLNDPSNDPSDPSSSGAAGANGGSP
GNGGSSGGSGNGGSGNSGAEGHAPVPVRLDLALARLAHLEVMVLLDLAVEVLAAVEMVVG
MAVTVEMAVTVEMAVAVVEPMVDRLVASVVVLQEGPHQDRLEDLVDLLDLVYLLDLLDLL
DLLDPLDPLDPLALLALLALLAPDRQAHRDLLALLAPLALLAPDRQAHRDLQDLLAHQAP
LTRELVFRARAVVLLLATTTTRLTTRLMLILLTPKTPTLLTDPLLPLLTTTTVRLLRLCS
LPWALKARFPICRATEPTLLGATNPRAVPRTVAWAAMVPCLVPPLLRFP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG