YALI0F21428g

Overview

Description some similarities with uniprot|P10667 Xenopus laevis Integumentary mucin A.1 precursor (FIM-A.1) (Preprospasmolysin)
Locus type CDS
Locus tag YALI0F21428g

Location

Species Yarrowia lipolytica Positions 2839294..2840022
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 729 (nuc.)
Previous locus YALI0F21417r Next locus YALI0F21450g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21428g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21428gYALI0F21428g_mRNA-001YALI0F21428g_CDS-001

Nucleotide sequence

 

>YALI0F21428g
ATGAAGTTCTCCGCTGCCGCTCTTATCTCTGCCGCTGGCCTTGTTGCCGCCCAGGTTGCC
AACGTTACCCTCGTCTCTACCGAGACTGTTGCCTCCACCCTCCTCCTCACCACCACTCAC
TGCTCTGACACCCCTTGTCACGCTGAGACTGAGGCCCCCAAGCCCGAGCCCAAGACCGTC
ACCCTGACCACCACTGACGTCAACGGTGTTACCATCACCACCACCTTCTGCCCCGAGACT
GAGCTCCCCACCCCTGCTCCCGTCCCTGCCAACTCTACCGTTGTGCCCGTCGGCCCCAAG
ACCATTACCCTCACCTTCACTGATGTCGAGGGTAAGACCGTCACCACCACTTTCTGCCCC
GAGACCGAGACCGCTGTTCCCACCATCCCTCTCACTCTTCACACTGTTCCCGTGGAGTCC
ATTGTTGTTCCTCCCCACCAGAACACCACCGTTGTTCCCGGACCCGTCCCCACCGCCTCC
AAGCCCGTTGTGCCTGAGGTCCCCGCCGGAAACTCCACCTCCACCGTTACTTCCATCACC
CGTGTTACCCTTACCCCCGTTCCCCAGGTTCCCGAGTCTACTCTCCCCGAGCAGGCTAAC
GGTGCCGGTGCTCTCGCCCCCATGGCCGGCCTGGCTCTTGCCGGTGCCATTGCTGCTCTC
ATCTAAGATGCTTGAGTAGCCACCCTTTAGACTTAACTTATACTAATTAATTGTTTGTAT
TTAGTTACG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F21428g_CDS-001

Protein length: 222 aa.
Product: Conserved hypothetical protein

>YALI0F21428g_CDS-001 MKFSAAALISAAGLVAAQVANVTLVSTETVASTLLLTTTHCSDTPCHAETEAPKPEPKTV
TLTTTDVNGVTITTTFCPETELPTPAPVPANSTVVPVGPKTITLTFTDVEGKTVTTTFCP
ETETAVPTIPLTLHTVPVESIVVPPHQNTTVVPGPVPTASKPVVPEVPAGNSTSTVTSIT
RVTLTPVPQVPESTLPEQANGAGALAPMAGLALAGAIAALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG