YALI0F21362g

Overview

Description weakly similar to uniprot|D5G8X6 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F21362g

Location

Species Yarrowia lipolytica Positions 2823342..2826227
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2886 (nuc.)
Previous locus YALI0F21329g Next locus YALI0F21373g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21362g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21362gYALI0F21362g_mRNA-001YALI0F21362g_CDS-001

Nucleotide sequence

 

>YALI0F21362g
ATGGCCAACAATAAAGAGCGAAAACGAAGCCACAAGAAAACGCCGAATCAATCCGTGTCT
TCCGCACAGTCTGAAACCGCCAAACGTCCCGCCAGAAAGAAGTCGCCCAAGCCCTCCACG
CCGGCGTCTCGCAACAAGAAACCCGTCACCGAAGGTTCCGTTTCGAAACCCGCAAATCGA
CCCAACACCGCCAATGGCAGACGCGGAGATCGGGAACGTAAGCCCTCACCATCTGTGGTG
TCACGAGGCTCAGCAGCTGCGACTATGACTATGACTCCTGAGCCTAGCAGCGTGCCTCTG
CAGCCCTGCCAGGTCACCCCGGCCATCCATTCGTCGCATCTGACCGTGCCTTCTGCGCTG
ACAGAAGATCGAAAACCGACACCCAAGAAACGCCGGTCGAGAGATACAGCCTCCAACCAA
CCCAACAAACGAAGTGAAGACATGCGGGAAGAGCAAGACAATGATGCCACCATGTCCTCC
CCGACCGCAAGTACCACATCCACTGCCTCTATGATGAGTACTCCAACTCCCACACCTGCA
TCTCCTGCCAGGTCGGCTGTCCACCAGGAACTTCAAAACATCTACCACCGAGTGTGCCAG
CTGGAAGATCAGTGTGGACGACTTATGCAGAAACTCGCACAGGAGATTCCTCAGAAGGAC
GAACCATGCATCACACAGCATACTGACATTCGTCAAGAGCGTCTCAACCGTCTACTGGCA
GATGCCACTAAGCGGCATGCTGCTCTACTGGACGCCCACTACGATTTCCTTCGAGCAGCT
CACTACAACGACTCTACGTCACTTCGTGGACTGGTCAACAAGTACGACATCCCTAGCAGA
CTGTGGTCCCGAGGAGTGTATGCCTTTGTGCACATTGCCCGGAACCTGCAGCCTTACGCG
GCCCGTTACCTGAATGACCACCTGAGACACTGTGCCCAGACACTCCTCTTGTTAGCAGAG
CCCTACTTTGACCGTGAAGCTGACGGTAAAAATCTTCCCTCTTGGACCGAAGCTGTTGGG
GATCTCGCTCGTATTGGCATGTCTGTTCGAACAGATGATGCCGTTTACTGGCGTGGAGTA
GCCCATTGGTGGTACAGCCGAACTCTTCTCACATACAACGACAATGGGCGGCCTCACCAC
CACTTTGCTCTAGTACTTGCATGCCGTCTGGAGTCATTATTGTCTCTCTGTCGTGCCACA
CTTTGTATGGTTCCGTTTGCACCCGCTTCTAATACAATGGATGCCCTGTTCAACGCTGGG
GCAGCCAAGATGCAGCGACAGGGCGAACGCGAACCCCTCGAGGTGGTCGTGGACTCCTTC
GTCTCCGTTCATGAAGGAGTCACCAAGGGTCGCTTTCCCAACATCCGTCAGAAGCTCATT
TCCTTGGGCGCTGTCATTGCTCGAACCCCAAGCCCCTTCTTGGCATCTCGATCTGCCATG
TTCGCTGCCATAAACATTGCTGGCTTGCATGAGTATGGTCGGGGAGCTCTAGCTGGAGTG
TGGAGAAACAGTGTGGACGAAGAAAACGTTGTTGTTCCCAGTCCGAACAAATATGTTGCA
TTTCACATTCTTCGTGCCCATCTAGCTCTCACATCGGATAAGGCTCTTCCTCACATTATT
CCCTGGCTGCTGTTCATGTTGGCTCTAACCAAACACCCCAAAGTGTTCCTCGAGGTGCTC
GACCATAGGTTCCCTTGGAAGGATATGCTGTGGTATCTCAACGAGATCCAGCGTAAAACT
GCCCGAGTTCCTGTTGACAACAACGACACAACTGGGTCCAATTTTAATTTCAAAAAGGCC
CCTCCCCCTCGCGAACTCCCCCCAGCTCCCAAGGGCTATGTTTCCAAACTCCCCGAAGAG
CTGCTTCTACGAGGCTTCTCATGGGCCAAAGAGGTCTTGTCTTGTCCTTTTGACAGTGAT
ACTCAAGACATTGTCAACACCATGTCTCTGGGTGGCCAACTGGACTACACTCTTGGAGAA
TGTACTAGGCTCGAGCGTGCTCAGGATCTCATCAGACAGCTATGTGATACTCGACTGTTA
AAACTGGGTGATTCCGGTCTTGAACAGGATCCCGAGCTGACTTCTTGTCTGGCATCCAAA
ACAGAAGCTCCTGACTACATCTCCGAGTACGAAGCATACCATGAGTTTCTGCCCGATATT
GGTGGAGAGAGCTCGTCAGTGACTTCTGATGACATTCAATCATTGTGCAAAAAACGAGAC
ATGGTGCGCCAGGAGTGTGGCGTTCAGTCCAAGATTGAAAACCTGGAACTGACCACTTCG
CCTCTGGCAGGTGAACGAAAGCCGGCCATTATTTTCGATACCAATCTATGGCTGAACGAA
CTGGAGTTCATCGTCACTGTGGTTGAGAGCGGTTGGCTGCGCATCAAAGTGCCTGTTATG
GTCATGCACGAGTTGCAGAAACTGCAGACATTTAACCGTGACGTCCGAACGAGCACCCTA
GCGCAACAGGCTCTGGCCTATATCAAGTCCAAGGGCCAAGGATCGAGTCTAACCATTGTT
GGTCTCGATGGAGCTGCTCTCAACGAGCAAGCTTGTGCCGAAGGTGTTGTTCGCTTTACC
AACGACTACGGGGGGCTGCCCAAACGTGGCCAGCCTACCATGGATGAGCTCATCACTCGA
ACCGTTTGCAAGTTGCAAAAGGGCAGTCGTGGGGGCGTTGTTCGAGCTCTGCTTGTCACC
AACGACAAGAACATGCGTATCTTGGCTCTGACACAATCTGTGGCAGTGTCCTCTGGTGCC
GAGTTCATGAACATGTACGGAGAGGAATCTGGAGAACGCCGCAACGAGACTCCTGGAATT
CGATCCATGCGAAGCAGAAAGAGCGAGCTCAGTGTATAAATAGCTAACTTATTGGTATTC
CATATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21362g_CDS-001

Protein length: 953 aa.
Product: Conserved hypothetical protein

>YALI0F21362g_CDS-001 MANNKERKRSHKKTPNQSVSSAQSETAKRPARKKSPKPSTPASRNKKPVTEGSVSKPANR
PNTANGRRGDRERKPSPSVVSRGSAAATMTMTPEPSSVPLQPCQVTPAIHSSHLTVPSAL
TEDRKPTPKKRRSRDTASNQPNKRSEDMREEQDNDATMSSPTASTTSTASMMSTPTPTPA
SPARSAVHQELQNIYHRVCQLEDQCGRLMQKLAQEIPQKDEPCITQHTDIRQERLNRLLA
DATKRHAALLDAHYDFLRAAHYNDSTSLRGLVNKYDIPSRLWSRGVYAFVHIARNLQPYA
ARYLNDHLRHCAQTLLLLAEPYFDREADGKNLPSWTEAVGDLARIGMSVRTDDAVYWRGV
AHWWYSRTLLTYNDNGRPHHHFALVLACRLESLLSLCRATLCMVPFAPASNTMDALFNAG
AAKMQRQGEREPLEVVVDSFVSVHEGVTKGRFPNIRQKLISLGAVIARTPSPFLASRSAM
FAAINIAGLHEYGRGALAGVWRNSVDEENVVVPSPNKYVAFHILRAHLALTSDKALPHII
PWLLFMLALTKHPKVFLEVLDHRFPWKDMLWYLNEIQRKTARVPVDNNDTTGSNFNFKKA
PPPRELPPAPKGYVSKLPEELLLRGFSWAKEVLSCPFDSDTQDIVNTMSLGGQLDYTLGE
CTRLERAQDLIRQLCDTRLLKLGDSGLEQDPELTSCLASKTEAPDYISEYEAYHEFLPDI
GGESSSVTSDDIQSLCKKRDMVRQECGVQSKIENLELTTSPLAGERKPAIIFDTNLWLNE
LEFIVTVVESGWLRIKVPVMVMHELQKLQTFNRDVRTSTLAQQALAYIKSKGQGSSLTIV
GLDGAALNEQACAEGVVRFTNDYGGLPKRGQPTMDELITRTVCKLQKGSRGGVVRALLVT
NDKNMRILALTQSVAVSSGAEFMNMYGEESGERRNETPGIRSMRSRKSELSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG