YALI0F20966g

Overview

Description weakly similar to uniprot|O13844 Schizosaccharomyces pombe Putative tricarboxylate transport protein
Locus type CDS
Locus tag YALI0F20966g

Location

Species Yarrowia lipolytica Positions 2789450..2790785
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1336 (nuc.)
Previous locus YALI0F20944g Next locus YALI0F20988g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20966g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20966gYALI0F20966g_mRNA-001YALI0F20966g_CDS-001

Nucleotide sequence

 

>YALI0F20966g
ATGTCGCGGCCATTGAATGTGAGAACAGACCCCATGAAGAGACTTCGTTTGTGAATCTCT
CGCCTTCCAATCCCCACTCTTTACTAACACAGAATGAAGATGTGAGTTATCGACACTGCG
CCTGAGGCAAGGCCACTTGCAGCCGCTCTACGTAAGATCATACCGAGCAACTATACTAAC
AGACAGTCATTGCTGACTGCCACCTTGGCAGGCGTTACTGCAGGACTTGTCCAGTCCTCT
CTAACTTGTGAGTATGAGATGAGTTGATATCGTGAACACCTCCGATGAGCACCCCACTAA
CTAGACCCCTTCGAGTTCATGAAGACGTCGCTCCAGCTGCGACGAAACCTTCCTGGAGCA
GCAGCATGGGTCCCCCCGGACTTTGGAAAGGTTTACTTCACTGGTCTGTCCGCCGTGGCC
ATTGGAGCCGCTACCAAGGCTGTTGTCCGAGTCTCTACCTTCACGGCCTTCTCCAAGTTC
ATGGCCGACGAAGACAACAGAACCACTGCTCCCCGAGTGGTCACTGCAGGTCTGCTCACG
GGTATTACCGAGAGTTTCATTGTGGTTCCTTTCGAATCCATTAAGACTACAATGATCAAC
CGAGTCCAGGTTGCCGCAGGCAAACCTGTTGCTGTGCCTCCTACTGAGATAAAGCTTCCG
GAGAAACCTGAGACTGCTGCCAAGGGACCTGTTGAGACTGCTCCCGTCACTATCAAGGAC
AAGAAACGTGTTGCTCGACCTACGGGAACCATCAAGCCTCCCACCGTCCACTATGGCCAG
ATTGATACCTCAGTCTCCGGACTCCTGGGCAACATCAAGGAGATGTATAAGGACCGAGGC
ATTCGAGCCTTTGTCCAGGGTTTCTTTCCCACTGTCACCCGACAGGCCGCAAACTCCGCC
GTTCGATTCACCACATACTCGGCCCTCAAGCACTGGCTTACTAACCCCGAAGACAGCGAA
TACGGCCGTCTCAGCGCCGTATGGGGCTTTGGTCTCGGCCTGCTGTCTTCTGGAGCCATG
GTCCTCGCCACACAGCCAATTGATGTCGTCAAGACCCGTCTACAGTCCATCCACGGTATC
AAGGAGTATCGATCGTCATTGCAGTGTGCCTACAAGATTTTTGTGGAGGAGGGAGTTATG
ACATTCTGGGCCGGTACTCTGCCTCGGTTCTGCAAGGCCGGTCTTAGTGGTGCCATCATT
TTCGGAACCTACGAGAGTGTCAGCAACGTCCTTAACGCTGCCTCTCAGAAGAAGCCTTTC
CCCCCTGGAGAGGAATAGACTGTTAGATAGTGTAAATACAATTGATTATAGCATGGAATG
CAGATATTGGTTCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20966g_CDS-001

Protein length: 354 aa.
Product: Conserved hypothetical protein

>YALI0F20966g_CDS-001 MSRPLNNEDSLLTATLAGVTAGLVQSSLTYPFEFMKTSLQLRRNLPGAAAWVPPDFGKVY
FTGLSAVAIGAATKAVVRVSTFTAFSKFMADEDNRTTAPRVVTAGLLTGITESFIVVPFE
SIKTTMINRVQVAAGKPVAVPPTEIKLPEKPETAAKGPVETAPVTIKDKKRVARPTGTIK
PPTVHYGQIDTSVSGLLGNIKEMYKDRGIRAFVQGFFPTVTRQAANSAVRFTTYSALKHW
LTNPEDSEYGRLSAVWGFGLGLLSSGAMVLATQPIDVVKTRLQSIHGIKEYRSSLQCAYK
IFVEEGVMTFWAGTLPRFCKAGLSGAIIFGTYESVSNVLNAASQKKPFPPGEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG