YALI0F20746g

Overview

Description highly similar to uniprot|P06839 Saccharomyces cerevisiae YER171w RAD3 DNA helicase/ATPase
Locus type CDS
Locus tag YALI0F20746g

Location

Species Yarrowia lipolytica Positions 2769959..2772372
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2414 (nuc.)
Previous locus YALI0F20724g Next locus YALI0F20768g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20746g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20746gYALI0F20746g_mRNA-001YALI0F20746g_CDS-001

Nucleotide sequence

 

>YALI0F20746g
ATGAAGTTCTACATCGATGATCTGCCGGTGTTGTGGCCATACCCTCGGATCTATCCCGAG
CAGTATGCCTACATGTGCGACATCAAGAAAACCCTGGACGTGGGAGGCAACTGCATCTTG
GAAATGCCTTCAGGAACAGGCAAGACTGTCTCCCTGTTGTCTCTGACAGTGGCGTACCAG
CAACACTATCCCGAGCATCGAAAGATCATTTATTGTTCCCGAACAATGTCGGAGATCGAG
AAGGCTCTGGCTGAGTTGAAGAACCTCATGAAGTTTCGAACTGAGACTCTAGGCTTTGAG
GAGGACTTTAGAGGGCTGGGTCTGACCTCACGAAAGAACCTGTGTCTGAATCCCAATGTG
CGATACGAAAAGAAAGGTTACATTGTCGACGAGAAGTGCCGAGCCATGACATCTGGAATT
GCCAAGCAGAAGCTGGCTGCAGGAGAAGACGTTACTCTATGTGAATACCACGAGAACATG
AACGACATTGAGCCTCACAACTACATTCCACCTGGTGTTTTCACCTTTGAGGACATTTTG
GCGTATGGCGAGGAGCACAAGACATGTCCTTATTTTACTGTGCGTCGAATGATGGCCTTC
TGCAACGTCATCATCTACTCTTATCATTATCTACTCGATCCCAAGATCGCCGACCGAGTT
TCCAAGGAGCTGAGCAAAGACTGCATTGTCATTTTTGATGAGGCCCATAATATCGACAAC
GTCTGCATTGAGGCTCTGTCTGTCGACATTACTGAAGACTCCCTGAAACGAGCCACTCGG
GGAGCAAACCATCTGGCCAAGAAGGTCAGTGAGGCCCGATCCAGCGACTCTGAGAAATTG
AAAAATGAATACAACAAACTGGTGGATGGATTGCGAGATCTGGAATCCGGAGAACAAGAA
GATACGTTTCTCGCTAACCCTGTGCTCCCTGAAGATCTTATTTCGGAAGCTGTGCCTGGA
AACATTCGAAAGGCAGAACATTTCGTGGCCTTCTTGAAACGATTCATTGAATATCTCAAG
AGTCGAATGAAGGTGCTTCATGTCATTTCCGAAACCCCTGCATCGTTCTTGAAACATCTT
CGAGATTTGACATACATTGAACGAAAGCCTCTTCGATTCTGCGCTGAGCGTCTATCGTAC
CTGGTCAGAACCCTCGAGTTGACTCACGTCGATGATTACACTGCTCTCAAGGAGATTGCT
GTGTTCGCCACCTTGGTGTCTACCTACGACACCGGCTTCCAGCTCATTCTGGAGCCCTTT
GAGACCGATCAGGCCACCGTTCCTAACCCCATTTTGCATCTTACATGTTTGGACGCCTCC
ATTGCTATCAAGCCTGTCTTTGATCGGTTCTCAAGCATCATCATCACATCCGGTACCATC
TCCCCTCTAGATATGTACCCGAAAATGTTGAACTTCGAGACTGTGGTTCAGGAGTCGTAC
ACCATGACACTGGCACGGCGAGCCTTCTGTCCTCTCATTGTGACCAAGGGTTCAGACCAG
GTAGCCATCAGTTCTCGATTCGAGATCCGAAACGATCCTTCAGTTGTCCGAAACTACGGT
AACCTTCTGATTGAATTTTCTAAGATCACACCTGATGGCCTTGTCGTCTTCTTCCCTTCA
TATCTTTACATGGAGTCTATCATTTCCATGTGGCAGACTATGGGTATTCTGGACGAAGTG
TGGAAGTACAAACTCATTCTGGTCGAGACTCCTGATGCTCAGGAAACCTCTCTTGCCTTA
GAAACTTACCGAACTGCCTGCTCCAACGGTCGAGGCGCTGTCATGCTCTGTGTCGCTCGA
GGAAAGGTTTCGGAAGGTATCGATTTCGACCACCAGTTTGGAAGAACTGTGCTTATGATT
GGTGTTCCTTTTCAGTACACCGAGTCGCGTATCTTGAAGGCTCGTCTCGAGTTTTTGCGA
GATAACTACCACATTCGAGAGAACGACTTCTTGTCTTTCGATGCCATGCGCCATGCTGCC
CAGTGTCTGGGACGAGTCTTGCGAGGTAAAGATGACTACGGTGTCATGGTGTTGGCTGAC
AGACGTTTTGCCAAGAAGCGAAACCAGCTGCCCAAATGGATCAACCAGGCCATTTTGGAT
GCTGACACAAATCTGTCCACAGATATGGCTCTAGCTGCAGCCAAGAAGTTTTTGCGAACT
ATGGCCCAGCCTATGAACAAGGAAGACCAGGAGGGTGTTTCAGTGTGGTCATTGGAGCAG
CTTCAGGAGTACCAGGGATCCAAAAAGGATGGAGGTTACCGACTTGCCCCCGAGGATGCC
ATGGATATCGATGAAAAGGATCTTGAAGAGGGTCTCAGAGAAGTCGAACAAGCCAAAAAA
GAAATTGCTGCTCGATAACAACGGTACGTACAGATATCCGTAGCAGCATATAATATAACA
AGCATTATTTAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20746g_CDS-001

Protein length: 786 aa.
Product: DNA helicase/ATPase, putative

>YALI0F20746g_CDS-001 MKFYIDDLPVLWPYPRIYPEQYAYMCDIKKTLDVGGNCILEMPSGTGKTVSLLSLTVAYQ
QHYPEHRKIIYCSRTMSEIEKALAELKNLMKFRTETLGFEEDFRGLGLTSRKNLCLNPNV
RYEKKGYIVDEKCRAMTSGIAKQKLAAGEDVTLCEYHENMNDIEPHNYIPPGVFTFEDIL
AYGEEHKTCPYFTVRRMMAFCNVIIYSYHYLLDPKIADRVSKELSKDCIVIFDEAHNIDN
VCIEALSVDITEDSLKRATRGANHLAKKVSEARSSDSEKLKNEYNKLVDGLRDLESGEQE
DTFLANPVLPEDLISEAVPGNIRKAEHFVAFLKRFIEYLKSRMKVLHVISETPASFLKHL
RDLTYIERKPLRFCAERLSYLVRTLELTHVDDYTALKEIAVFATLVSTYDTGFQLILEPF
ETDQATVPNPILHLTCLDASIAIKPVFDRFSSIIITSGTISPLDMYPKMLNFETVVQESY
TMTLARRAFCPLIVTKGSDQVAISSRFEIRNDPSVVRNYGNLLIEFSKITPDGLVVFFPS
YLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRTACSNGRGAVMLCVAR
GKVSEGIDFDHQFGRTVLMIGVPFQYTESRILKARLEFLRDNYHIRENDFLSFDAMRHAA
QCLGRVLRGKDDYGVMVLADRRFAKKRNQLPKWINQAILDADTNLSTDMALAAAKKFLRT
MAQPMNKEDQEGVSVWSLEQLQEYQGSKKDGGYRLAPEDAMDIDEKDLEEGLREVEQAKK
EIAAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG