YALI0F20702g - PDA1

Overview

Description uniprot|Q6C0Y7 Yarrowia lipolytica YALI0F20702g PDA1 Pyruvate Dehydrogenase Alpha subunit
Locus type CDS
Gene name PDA1
Locus tag YALI0F20702g

Location

Species Yarrowia lipolytica Positions 2761593..2763273
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1681 (nuc.)
Previous locus YALI0F20680g Next locus YALI0F20724g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20702g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20702gYALI0F20702g_mRNA-001YALI0F20702g_CDS-001

Nucleotide sequence

 

>YALI0F20702g
ATGCTCACTGCCGCTCGACGATCTACACGGCTCACCAGCCGACTCGGCCACCAGGTCCGA
GCATACTCCATCGCTGACGATGCCGACAAGGTGAGTATTTTTTTCGCCCATTGCGTTGGG
GTGTCGTGGATTTGGGTTACAGGGAGTTTTTCCGAAACATACGCCTCACGAAACACGACG
AAACGGACGACACAGACATGCCATCGACGCGGGACCCCTCGGAATTGATTCTACGGATGC
CATTACCCCTGGCGGTGGCGTCTCGTTGACGCTGCTGAGATTGTTAATGAGAAACGGGCC
TAGAGAAAATCGAACCTCTAGGAACGCATGCACCCGGAAAAATTATTCCTCACCCACCAG
CAATCCATCACAAAACGTGGCAAAACAGCTTCAATCGACCGTATACTAACCCCAGAAATG
CACAATCACGCTCAAGGAGGATTCTTACACCACCTACATGCTTGATTCTCCCCCTCCTCT
CGAGTTCGAGATGACCAAGGGTGAGCTTCTGCAAATGTACAAGGACATGGTGACCGTCCG
ACGACTCGAGATGGCTGCTGATGCCCTCTACAAGGCCAAGAAGATCCGAGGTTTCTGCCA
TCTGTCTACTGGTCAGGAGGCTGTTGCCGTCGGTATCGAGAAGGCCATCGACCACGACGA
TTCTGTCATCACCGCCTACCGATGCCACGGTTTCGCCTACATGCGAGGTGCCTCTGTCCG
AGCAATCATCGCCGAGCTGCTCGGAAAGCGAACCGGTGTCTCCTACGGTAAGGGTGGATC
CATGCACATGTTCACCGAGGGTTTCTACGGAGGAAACGGTATTGTCGGAGCCCAGGTCCC
CGTCGGAGCTGGTCTCGCCTTCGCCCACAAGTACCTCGAGCAGACCGGAAAGGCCACCTT
TGCCCTGTACGGTGACGGTGCTTCCAACCAGGGTCAGATCTTCGAGGCCTACAACATGGC
CAAGCTCTGGGACCTCCCCTGCATCTTTGCATGCGAGAACAACAAGTACGGAATGGGTAC
CGCTGCTGCTCGATCCTCTGCCCTGACGCAGTACTACAAGCGAGGTCAGTACATTCCCGG
TCTCAAGGTTAACGGAATGGACATTCTGTCCGTCTACCAGGGAGCCAAGTTCGCCAAGGA
GTGGACCACACACGGCAAGGGTCCCCTCGTCATGGAGTTCGAGACCTACCGATACGGTGG
TCACTCCATGTCCGATCCCGGAACCACCTACCGAACCCGAGAGGAGATCCAGTACATGCG
ATCCCACAACGATCCTATTTCTGGTCTCAAGGCCCACATCCTGGAGCTTAATTTCGCCAC
TGAGGACGAGCTTAAGTCTGTGGACAAGGCTGCTCGAGCTATGGTTGACAAGGAGGTTGC
CCTTGCTGAGTCCGACCCTGCTCCTGAGGCTACTGCCAAGGTTCTGTTTGAGGATATCTA
CGTTCCCGGCACCGAGCCTCCTGTGATCCGAGGCCGAATCCCTTCCGAGGACTACTACTT
TAAGAACTAAGTAGAGTAGAATGTAATTACTAATGTACGAGCCGTCGTTTTCTGAGAATG
AGTAGAAAGCAGGAGTACAGTACATAGATTGGGTGAGCTTGAAGTGATTGTGGAAAATGT
TGCGAGAGAAACATGGTGAATAGTAAGTGAGAAAGAATTTATCCCATTTATTTTATCATT
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20702g_CDS-001

Protein length: 395 aa.
Product: Pyruvate Dehydrogenase Alpha subunit
Gene: PDA1

>YALI0F20702g_CDS-001 MLTAARRSTRLTSRLGHQVRAYSIADDADKKCTITLKEDSYTTYMLDSPPPLEFEMTKGE
LLQMYKDMVTVRRLEMAADALYKAKKIRGFCHLSTGQEAVAVGIEKAIDHDDSVITAYRC
HGFAYMRGASVRAIIAELLGKRTGVSYGKGGSMHMFTEGFYGGNGIVGAQVPVGAGLAFA
HKYLEQTGKATFALYGDGASNQGQIFEAYNMAKLWDLPCIFACENNKYGMGTAAARSSAL
TQYYKRGQYIPGLKVNGMDILSVYQGAKFAKEWTTHGKGPLVMEFETYRYGGHSMSDPGT
TYRTREEIQYMRSHNDPISGLKAHILELNFATEDELKSVDKAARAMVDKEVALAESDPAP
EATAKVLFEDIYVPGTEPPVIRGRIPSEDYYFKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG