YALI0F20482g

Overview

Description highly similar to uniprot|P0CX47 Saccharomyces cerevisiae YDR025W (ohnolog of YBR048W) RPS11A ribosomal protein
Locus type CDS
Locus tag YALI0F20482g

Location

Species Yarrowia lipolytica Positions 2723070..2723831
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 762 (nuc.)
Previous locus YALI0F20460g Next locus YALI0F20504g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20482g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20482gYALI0F20482g_mRNA-001YALI0F20482g_CDS-001

Nucleotide sequence

 

>YALI0F20482g
ATGTCCGAGCTTCACGTCCAGAACGAGCGAGCTTTCCAGAAGGTGAGTCAGGGAATTGTT
GACAGGAGGAGCTGTTAATTGCTGAGCAACGAGTGCACTCGACAAGTCACAACAGGTGGT
CATTTGGTATTGATTTGAGATCACGCGACAGACATCCAGGGCCGAGATACGGGAGGATAT
GACCATTTGCGACAAACAGCACGCACTCATAGTAGCATGACAGGCTGTACAGCTATCTAT
CATCACTCGAACACAACTAACTCAGCAACCTCACATCTTCCAGAACGCCAAGTCCAAGGT
CAACCGAAAGACCAAGCGATGGTATAAGGAGGTCGGTCTCGGATTCAAGACCCCCTCTGC
CGCCATCACCGGTGACTACATTGACAAGAAGTGCCCCTTTGTTGGTGACATTTCTATCCG
AGGCAAGATCCTGACTGGTAAGGTTGTCTCCACCAAAATGCACAGAACCATCATCATCCG
ACGAGAGTACCTCCACTACATCCCCAAGTACAACCGATACGAGAAGCGACACAAGAACCT
CGCTGCCCACGTCTCTCCCGCTTTCCGAGTCGAGAACGGCGATATGGTTACCGTTGGTCA
GTGCCGACCTCTCTCCAAGACCGTTCGATTCAACGTTCTCCGAGTTCTGCCTGCCACCGG
TAAGGCTAACAAGGCCTTCTCCAAGTTCTAAACTTGAAAAAATCTAGTAAGATATTGTAT
TAAAAATCGTCAAGCTTAATGAGATTTGTAATGAGTTACTGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F20482g_CDS-001

Protein length: 156 aa.
Product: Ribosomal 40S subunit protein S11, putative

>YALI0F20482g_CDS-001 MSELHVQNERAFQKQPHIFQNAKSKVNRKTKRWYKEVGLGFKTPSAAITGDYIDKKCPFV
GDISIRGKILTGKVVSTKMHRTIIIRREYLHYIPKYNRYEKRHKNLAAHVSPAFRVENGD
MVTVGQCRPLSKTVRFNVLRVLPATGKANKAFSKF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG